RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 SIGLEC15Q6ZMC9 328 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 C15orf52Q6ZUT6 534 aaKnown RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 RIMKLAQ8IXN7 391 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 FBXO39Q8N4B4 442 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 RFESDQ8TAC1 157 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 SECISBP2LQ93073 1101 aaKnown RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 UCN3Q969E3 161 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 C18orf25Q96B23 403 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 EXOSC8Q96B26 276 aaKnown RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 SAAL1Q96ER3 474 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZBED3Q96IU2 234 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 DRC1Q96MC2 740 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 DDX50Q9BQ39 737 aaKnown RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 GCOM2Q9BZD3 368 aaPredicted RBP-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 RAB33BQ9H082 229 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 KCNK15Q9H427 330 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC40A1Q9NP59 571 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 GSN-AS1Q9NRJ2 163 aa-1.92□□□□□ -2.72
RNU6-539P-201ENST00000516665 MDC1Q14676 2089 aaKnown RBP-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 IGHV1OR15-1A0A075B7D0 117 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 DHRS7CA6NNS2 312 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 C9JVG2 144 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 MMP10P09238 476 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 MT4P47944 62 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 FHITP49789 147 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 RARSP54136 660 aaKnown RBP-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 PRRX1P54821 245 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC12A1Q13621 1099 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 GUSBP11Q6P575 273 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 GIMAP6Q6P9H5 292 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 C6orf89Q6UWU4 347 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZBTB49Q6ZSB9 765 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 DNAJB7Q7Z6W7 309 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 GPBP1Q86WP2 473 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM173Q86WV6 379 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 VSTM4Q8IW00 320 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 FTSJ3Q8IY81 847 aaKnown RBP-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 DNAAF3Q8N9W5 541 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 COLGALT1Q8NBJ5 622 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 TIMD4Q96H15 378 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 UBXN10Q96LJ8 280 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 ABHD1Q96SE0 405 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 MED17Q9NVC6 651 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 FAM206AQ9NX38 181 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 SIGLEC8Q9NYZ4 499 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 BARX2Q9UMQ3 279 aaPredicted RBP-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 HYDINQ4G0P3 5121 aa-1.93□□□□□ -2.72
RNU6-539P-201ENST00000516665 ATG2BQ96BY7 2078 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 BRD4O60885 1362 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 A0A0A6YYD4 124 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 A0A1B0GVX0 72 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 SIGLEC16A6NMB1 481 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 K7ERI5 159 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 XKRYO14609 159 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 GNA14O95837 355 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 INAFM2P0DMQ5 153 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 IGLL1P15814 213 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 TCF4P15884 667 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 DPP4P27487 766 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 AQP1P29972 269 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 MAGEA3P43357 314 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 LIM2P55344 173 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 NIPAL4Q0D2K0 466 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 CUL3Q13618 768 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 CCNG2Q16589 344 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 ASTE1Q2TB18 679 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 TTC27Q6P3X3 843 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 CASP12Q6UXS9 341 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 C17orf107Q6ZR85 190 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 NTM-AS1Q6ZSK4 140 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 RFLNAQ6ZTI6 216 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 ANKRD33Q7Z3H0 272 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 CAMK2N1Q7Z7J9 78 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 THOC6Q86W42 341 aaKnown RBP-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 CEP57Q86XR8 500 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 EGFL6Q8IUX8 553 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 MCEMP1Q8IX19 187 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 PNKDQ8N490 385 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 DNAJA4Q8WW22 397 aaPredicted RBP-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR1E3Q8WZA6 343 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 SMARCE1Q969G3 411 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 APOPT1Q96IL0 206 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 C1orf74Q96LT6 269 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 OR2A5Q96R48 311 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 C17orf62Q9BQA9 187 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 TXNDC17Q9BRA2 123 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 TTTY12Q9BZ98 90 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 SLC25A37Q9NYZ2 338 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZNRD1Q9P1U0 126 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 TRMT6Q9UJA5 497 aaKnown RBP-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 TMEM14AQ9Y6G1 99 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 NF1P21359 2839 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 ZBED9Q6R2W3 1325 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 KDM3AQ9Y4C1 1321 aa-1.94□□□□□ -2.72
RNU6-539P-201ENST00000516665 RYR1P21817 5038 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 LAMA5O15230 3695 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 CARMIL3Q8ND23 1372 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 ANKRD30BQ9BXX2 1392 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 TRAV24A0A0B4J272 114 aa-1.95□□□□□ -2.72
RNU6-539P-201ENST00000516665 H7C417 338 aa-1.95□□□□□ -2.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms