RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 SEC16AO15027 2179 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SCAMP2O15127 329 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 UBDO15205 165 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RRP8O43159 456 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CHST10O43529 356 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TLX3O43711 291 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FGF17O60258 216 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PLOD3O60568 738 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KLHL41O60662 606 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CCDC22O60826 627 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DIAPH2O60879 1101 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CTNSO60931 367 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SCN2BO60939 215 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CNOT3O75175 753 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PEX11AO75192 247 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 COQ9O75208 318 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ALOX12BO75342 701 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SEC22BO75396 215 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RDH16O75452 317 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CREG1O75629 220 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ATP6AP2O75787 350 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KLF7O75840 302 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 BCAS2O75934 225 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DCTN3O75935 186 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SOX30O94993 753 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SCAF4O95104 1147 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PSMG1O95456 288 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GPR75O95800 540 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 AIFM1O95831 613 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NPPAP01160 153 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IGKV3-11P04433 115 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IL6P05231 212 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SERPIND1P05546 499 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 KLK1P06870 262 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 UMODP07911 640 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 VIMP08670 466 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IL3P08700 152 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ANXA4P09525 319 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LINC00032P0C843 101 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZCCHC18P0CG32 403 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLC35E2P0CK97 266 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C8orf89P0DMQ9 161 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 G6PDP11413 515 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ICAM2P13598 275 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 COX7A2P14406 83 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TCN2P20062 427 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CPN2P22792 545 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLC6A2P23975 617 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PEX2P28328 305 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PRDX6P30041 224 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NTSP30990 170 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MPIP34949 423 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 HPCAL1P37235 193 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 EIF2S3P41091 472 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FOLR3P41439 243 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 XCR1P46094 333 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 STT3AP46977 705 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 OR1D4P47884 311 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZFP36L2P47974 494 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MAN2A2P49641 1150 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CHN2P52757 468 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ARFIP2P53365 341 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 AQP5P55064 265 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 DIO3P55073 304 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SUMO3P55854 103 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SOX8P57073 446 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TAS2R50P59544 299 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RAB8AP61006 207 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 STX1BP61266 288 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RAB1AP62820 205 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RPS15P62841 145 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NKX6-1P78426 367 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MAT1AQ00266 395 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NHLH2Q02577 135 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 FUT7Q11130 342 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CDC20Q12834 499 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CHAF1BQ13112 559 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLAMF1Q13291 335 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RUNX2Q13950 521 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SQLEQ14534 574 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MDC1Q14676 2089 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PTGR1Q14914 329 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 MAPRE2Q15555 327 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 EXT1Q16394 746 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 LSM12Q3MHD2 195 aaKnown RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SPDYE7PQ495Y7 208 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 NRN1LQ496H8 165 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SLC9B1Q4ZJI4 515 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 RFTN2Q52LD8 501 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 GKAP1Q5VSY0 366 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 C1orf189Q5VU69 101 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 IL23RQ5VWK5 629 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PLAG1Q6DJT9 500 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 ZCCHC12Q6PEW1 402 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 INO80CQ6PI98 192 aaPredicted RBP2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 CYP20A1Q6UW02 462 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 SCIMPQ6UWF3 145 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 TMEM64Q6YI46 380 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 WDR87Q6ZQQ6 2873 aa2.04□□□□□ -2.08
SCARNA16.3-201ENST00000516595 PIGWQ7Z7B1 504 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms