RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 RASA2Q15283 850 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 KRT31Q15323 416 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PKN2Q16513 984 aaKnown RBP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 AANATQ16613 207 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 DPCR1Q3MIW9 517 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 MFSD12Q6NUT3 480 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZBTB49Q6ZSB9 765 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 NTM-AS1Q6ZSK4 140 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 LCA10Q71F78 164 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 CHST9Q7L1S5 443 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 COX8CQ7Z4L0 72 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PIGWQ7Z7B1 504 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 GPBP1Q86WP2 473 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR52I1Q8NGK6 324 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 FAM110BQ8TC76 370 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 SECISBP2LQ93073 1101 aaKnown RBP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 UCN3Q969E3 161 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PNPLA2Q96AD5 504 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 C18orf25Q96B23 403 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 EXOSC8Q96B26 276 aaKnown RBP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 C16orf58Q96GQ5 468 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZBED3Q96IU2 234 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 CCDC138Q96M89 665 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 GCOM2Q9BZD3 368 aaPredicted RBP-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PRRG4Q9BZD6 226 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 RNF121Q9H920 327 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC40A1Q9NP59 571 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 EXOC1Q9NV70 894 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 FAM206AQ9NX38 181 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 PPP1R14DQ9NXH3 145 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 GRHPRQ9UBQ7 328 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 CARMIL3Q8ND23 1372 aa-1.61□□□□□ -2.67
RNU6-542P-201ENST00000516405 MN1Q10571 1320 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 IGHV1OR15-1A0A075B7D0 117 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A1B0GVX0 72 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 B4GAT1O43505 415 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 NUDT14O95848 222 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 INAFM2P0DMQ5 153 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 DPP4P27487 766 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 MAGEA3P43357 314 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF140P52738 457 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 PRRX1P54821 245 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 LIM2P55344 173 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 EIF3BP55884 814 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 RPL27P61353 136 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 ESRRGP62508 458 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 OLR1P78380 273 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 GALK2Q01415 458 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 MAPK11Q15759 364 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 LONRF1Q17RB8 773 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC5A12Q1EHB4 618 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 ATG16L1Q676U5 607 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 ITPRIPL1Q6GPH6 555 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 TEX38Q6PEX7 206 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 CASP12Q6UXS9 341 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZNF730Q6ZMV8 503 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 RFLNAQ6ZTI6 216 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 C15orf52Q6ZUT6 534 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 DNAJB7Q7Z6W7 309 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 THOC6Q86W42 341 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 C17orf82Q86X59 251 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 VSTM4Q8IW00 320 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 RIMKLAQ8IXN7 391 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 CACNA2D3Q8IZS8 1091 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC43A2Q8N370 569 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 FRMD1Q8N878 549 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 COLGALT1Q8NBJ5 622 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR10G9Q8NGN4 311 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 RAB7BQ96AH8 199 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 INTS12Q96CB8 462 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 TIMD4Q96H15 378 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SFXN2Q96NB2 322 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 OR2A5Q96R48 311 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 NR1H4Q96RI1 486 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SRSF8Q9BRL6 282 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 TTTY12Q9BZ98 90 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 KCNK15Q9H427 330 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 GSN-AS1Q9NRJ2 163 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SMC4Q9NTJ3 1288 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SLC25A37Q9NYZ2 338 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 SIGLEC8Q9NYZ4 499 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 EIF3KQ9UBQ5 218 aaKnown RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 ATP6V1HQ9UI12 483 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 BARX2Q9UMQ3 279 aaPredicted RBP-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 CMAHPQ9Y471 501 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 TMEM14AQ9Y6G1 99 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 STAB2Q8WWQ8 2551 aa-1.62□□□□□ -2.67
RNU6-542P-201ENST00000516405 RYR1P21817 5038 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 A0A0A6YYD4 124 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 SH3PXD2BA1X283 911 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 DHRS7CA6NNS2 312 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 K7ERI5 159 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 AQP9O43315 295 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 PRAMEF11O60813 436 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 CLSTN1O94985 981 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 ZWINTO95229 277 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 GNA14O95837 355 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 IGLV2-23P01705 113 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 IGLL1P15814 213 aa-1.63□□□□□ -2.67
RNU6-542P-201ENST00000516405 AQP1P29972 269 aa-1.63□□□□□ -2.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms