RNA–Protein interactions for RNA: ENST00000515343.1

AC025539.1-201, humanhuman

TSL 2 BASIC

Gene AC025539.1, Length 4,019 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC025539.1-201ENST00000515343 POLR2DO15514 142 aaKnown RBP1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 TSPAN2O60636 221 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 TOXO94900 526 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 ACSL3O95573 720 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 CDH3P22223 829 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 GLRA2P23416 452 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 CCND2P30279 289 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 MDH1P40925 334 aaKnown RBP1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 MAGEA9P43362 315 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 PSMC4P43686 418 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 POLR2GP62487 172 aaKnown RBP eCLIP1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 CDC20Q12834 499 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 RPA4Q13156 261 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 CUL2Q13617 745 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 GNA13Q14344 377 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 MAPRE2Q15555 327 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 POM121L1PQ3SYA9 428 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 IQCCQ4KMZ1 466 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 LBHQ53QV2 105 aaPredicted RBP1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 LEG1Q6P5S2 330 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 CEACAM20Q6UY09 585 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 B3GLCTQ6Y288 498 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 BHLHA15Q7RTS1 189 aaPredicted RBP1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 SPATA21Q7Z572 469 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 SLC22A16Q86VW1 577 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 CDH26Q8IXH8 852 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 C12orf56Q8IXR9 622 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 NUP93Q8N1F7 819 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 OR13C3Q8NGS6 347 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 PYCR2Q96C36 320 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 POM121L2Q96KW2 1035 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 LRR1Q96L50 414 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 LINC00479Q96M42 142 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 IL12RB2Q99665 862 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 FTHL17Q9BXU8 183 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 LRRC19Q9H756 370 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 ACTR3BQ9P1U1 418 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 TRPC4Q9UBN4 977 aa1.4□□□□□ -2.18
AC025539.1-201ENST00000515343 FRAS1Q86XX4 4008 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 IGHV3-38A0A0C4DH36 116 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 PRSS46E5RG02 174 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 IKBKBO14920 756 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 OTCP00480 354 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NPPAP01160 153 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 FGF4P08620 206 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 C4BPBP20851 252 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CCND3P30281 292 aaPredicted RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 TNFSF10P50591 281 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 UBE2HP62256 183 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 RAPSNQ13702 412 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 IMMTQ16891 758 aaKnown RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 IZUMO4Q1ZYL8 232 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ZNF674Q2M3X9 581 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 C6orf163Q5TEZ5 329 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ARHGAP22Q7Z5H3 698 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 VPS36Q86VN1 386 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NAV2Q8IVL1 2488 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CCDC170Q8IYT3 715 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 DND1Q8IYX4 353 aaKnown RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ANKRD13CQ8N6S4 541 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CCDC185Q8N715 623 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 SGK3Q96BR1 496 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NAP1L3Q99457 506 aaPredicted RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CGREF1Q99674 301 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 LLPHQ9BRT6 129 aaKnown RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 MTIF3Q9H2K0 278 aaKnown RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 VCX3BQ9H321 246 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 RNPEPL1Q9HAU8 725 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 C12orf10Q9HB07 376 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 SCRT2Q9NQ03 307 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 TMEM161AQ9NX61 479 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 TAAR2Q9P1P5 351 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 RNF215Q9Y6U7 377 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 FAT4Q6V0I7 4981 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 GREB1Q4ZG55 1949 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 WDR81Q562E7 1941 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NID2Q14112 1375 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 MYO18BQ8IUG5 2567 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ZNF732B4DXR9 585 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NPIPB9F8W1W9 429 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 H0YIG0 161 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 SGK1O00141 431 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ARHGEF9O43307 516 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CPNE6O95741 557 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ECDO95905 644 aaPredicted RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 FCER2P06734 321 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CTRB1P17538 263 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 SH3BGRP55822 239 aaPredicted RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 UCP2P55851 309 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 DSTNP60981 165 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 GMFBP60983 142 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ABCE1P61221 599 aaKnown RBP1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NUCB2P80303 420 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 GCNT1Q02742 428 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NFATC2Q13469 925 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ARMCX4Q5H9R4 360 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 NKAIN2Q5VXU1 208 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 OLFML2AQ68BL7 652 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 ATL3Q6DD88 541 aa1.4□□□□□ -2.19
AC025539.1-201ENST00000515343 CTRB2Q6GPI1 263 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms