RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 OR4C11Q6IEV9 310 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 SLC27A4Q6P1M0 643 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 LEKR1Q6ZMV7 388 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 Q71RC1 249 aaPredicted RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 TRMT11Q7Z4G4 463 aaKnown RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 C12orf29Q8N999 325 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 WDSUB1Q8N9V3 476 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 TRIM58Q8NG06 486 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 FIBINQ8TAL6 211 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 UBA3Q8TBC4 463 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 SLC2A14Q8TDB8 520 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 NELFBQ8WX92 580 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 TAF4BQ92750 862 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 AZIN2Q96A70 460 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 PCED1BQ96HM7 432 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 AGAP3Q96P47 875 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 NEDD4LQ96PU5 975 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 GSDMAQ96QA5 445 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 PCDHB18PQ96TA0 734 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 KRT12Q99456 494 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 HOXD1Q9GZZ0 328 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 LINC00597Q9H2U6 94 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 C8orf33Q9H7E9 229 aaPredicted RBP3.65□□□□□ -1.83
HTT-210ENST00000512909 SP140LQ9H930 580 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 DMAC2Q9NW81 257 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 RAB20Q9NX57 234 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 NLGN3Q9NZ94 848 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 PILRBQ9UKJ0 227 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 GPR132Q9UNW8 380 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 SATB2Q9UPW6 733 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 TRAF3IP3Q9Y228 551 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 ANGPTL3Q9Y5C1 460 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 MYO9BQ13459 2157 aa3.65□□□□□ -1.83
HTT-210ENST00000512909 hCG_38984A0A1B0GV85 526 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 A0A1W2PRV1 198 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 BICDL2A1A5D9 508 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 MSGN1A6NI15 193 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 NKX6-3A6NJ46 265 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 SPECC1L-ADORA2AF8WAN1 911 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 NR5A2O00482 541 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 HSF2BPO75031 334 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 GMNNO75496 209 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 MTRF1O75570 445 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 PRAMEF12O95522 483 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 SLC16A8O95907 504 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 MT-ND2P03891 347 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 FAM200BP0CF97 657 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 CCDC192P0DO97 292 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 RALAP11233 206 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 KRT5P13647 590 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 HMGA1P17096 107 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 STIP1P31948 543 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 SERPINB6P35237 376 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 ATP5C1P36542 298 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 SOX3P41225 446 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 MTIF2P46199 727 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 LEPRP48357 1165 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 ABCE1P61221 599 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 YWHAEP62258 255 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 PDGFRLQ15198 375 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 FAM106AQ4KMX7 169 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 HSP90AA4PQ58FG1 418 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 C10orf120Q5SQS8 335 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 ADAMTSL4-AS1Q5T5F5 129 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 ARHGAP17Q68EM7 881 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 PODNL1Q6PEZ8 512 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 LCLAT1Q6UWP7 414 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 TPGS1Q6ZTW0 290 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 COX8CQ7Z4L0 72 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 CPEB2Q7Z5Q1 589 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 LRRTM1Q86UE6 522 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 RALGPS2Q86X27 583 aaPredicted RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 TMEM126BQ8IUX1 230 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 SIAH3Q8IW03 269 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 AQP12AQ8IXF9 295 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 C12orf56Q8IXR9 622 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 KLHDC8AQ8IYD2 350 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 FBXL13Q8NEE6 735 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 LPCAT1Q8NF37 534 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 OR13C5Q8NGS8 318 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 ZNF519Q8TB69 540 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 RNF139Q8WU17 664 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 GATAD1Q8WUU5 269 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 SMARCD1Q96GM5 515 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 DHTKD1Q96HY7 919 aaPredicted RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 P2RY13Q9BPV8 354 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 ELOVL4Q9GZR5 314 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 VIPAS39Q9H9C1 493 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 ZDHHC18Q9NUE0 388 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 CACNG5Q9UF02 275 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 BAIAP2L1Q9UHR4 511 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 TEKT2Q9UIF3 430 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 LSM7Q9UK45 103 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 CCL26Q9Y258 94 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 HBS1LQ9Y450 684 aaKnown RBP3.64□□□□□ -1.83
HTT-210ENST00000512909 KLK4Q9Y5K2 254 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 CPQQ9Y646 472 aa3.64□□□□□ -1.83
HTT-210ENST00000512909 A0A087WZ39 114 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 MAGEB16A2A368 324 aa3.63□□□□□ -1.83
HTT-210ENST00000512909 ZNF840PA6NDX5 716 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms