RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 FAM210AQ96ND0 272 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 PLIN2Q99541 437 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 TMEM245Q9H330 911 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 ADGRL4Q9HBW9 690 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 DNAJC11Q9NVH1 559 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 CELA1Q9UNI1 258 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 SMARCA4P51532 1647 aa3.99□□□□□ -1.77
CHD1-209ENST00000512844 SMARCA2P51531 1590 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 ARPC4-TTLL3A0A0A6YYG9 625 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 SLC9B1P1A6NJY1 282 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 L7N2F9 121 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 M0QX08 132 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TNFSF11O14788 317 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 POLR3GO15318 223 aaPredicted RBP3.98□□□□□ -1.77
CHD1-209ENST00000512844 CTAGE5O15320 804 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 E2F6O75461 281 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 PDE5AO76074 875 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 ALPPP05187 535 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TSPY4P0CV99 314 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TSPY10P0CW01 314 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 ALPPL2P10696 532 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 GDF1P27539 372 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 MAGEA4P43358 317 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 ATP5OP48047 213 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 YBEYP58557 167 aaPredicted RBP3.98□□□□□ -1.77
CHD1-209ENST00000512844 ACTR1AP61163 376 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 C17orf67Q0P5P2 114 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 MXD4Q14582 209 aaPredicted RBP3.98□□□□□ -1.77
CHD1-209ENST00000512844 PDK1Q15118 436 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 FILIP1LQ4L180 1135 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 SERPINA12Q8IW75 414 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 MLKLQ8NB16 471 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 OR56B2PQ8NGI1 322 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 URGCPQ8TCY9 931 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TFB1MQ8WVM0 346 aaKnown RBP3.98□□□□□ -1.77
CHD1-209ENST00000512844 THRSPQ92748 146 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 MAPKAP1Q9BPZ7 522 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 GPR174Q9BXC1 333 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TM9SF3Q9HD45 589 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TRPV5Q9NQA5 729 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP3.98□□□□□ -1.77
CHD1-209ENST00000512844 HMG20BQ9P0W2 317 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 PRODH2Q9UF12 536 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 IKZF3Q9UKT9 509 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 RPH3AQ9Y2J0 694 aaPredicted RBP3.98□□□□□ -1.77
CHD1-209ENST00000512844 CCDC88BA6NC98 1476 aa3.98□□□□□ -1.77
CHD1-209ENST00000512844 TTC21BQ7Z4L5 1316 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 A0A0A6YYD4 124 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 A0A0J9YVX5 310 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 A0A1W2PQ72 361 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 C5orf51A6NDU8 294 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 CCT8L1PA6NM43 557 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 SAP18O00422 153 aaKnown RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 IDH1O75874 414 aaKnown RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 NEFHP12036 1026 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 PVRP15151 417 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 FCARP24071 287 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 ACP1P24666 158 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 GBX2P52951 348 aaPredicted RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 VCPP55072 806 aaKnown RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 CASP9P55211 416 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 UCP2P55851 309 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 CCNA1P78396 465 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 CUL2Q13617 745 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 PDE7AQ13946 482 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 GAMTQ14353 236 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 CARTPTQ16568 116 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 MAJINQ3KP22 176 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 AFTPHQ6ULP2 937 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 ZNF410Q86VK4 478 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 COLGALT1Q8NBJ5 622 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 GTSF1Q8WW33 167 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 SLC5A11Q8WWX8 675 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 BADQ92934 168 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 GPR137Q96N19 417 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 ZIM3Q96PE6 472 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 RANBP9Q96S59 729 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 CPXM1Q96SM3 734 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 NAP1L3Q99457 506 aaPredicted RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 YTHDF1Q9BYJ9 559 aaKnown RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 NRN1Q9NPD7 142 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 ESM1Q9NQ30 184 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 PIGVQ9NUD9 493 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.97□□□□□ -1.77
CHD1-209ENST00000512844 ZNF446Q9NWS9 450 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 COPS7AQ9UBW8 275 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 SUN2Q9UH99 717 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 PTBP2Q9UKA9 531 aaKnown RBP3.97□□□□□ -1.77
CHD1-209ENST00000512844 CCPG1Q9ULG6 757 aa3.97□□□□□ -1.77
CHD1-209ENST00000512844 ERICH3Q5RHP9 1530 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 ARPC1BO15143 372 aaKnown RBP3.96□□□□□ -1.78
CHD1-209ENST00000512844 MAGEB3O15480 346 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 SSX5O60225 188 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 KRTAP1-4P0C5Y4 121 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 HSPA5P11021 654 aaKnown RBP3.96□□□□□ -1.78
CHD1-209ENST00000512844 HOXD10P28358 340 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 CCND2P30279 289 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 GDI1P31150 447 aa3.96□□□□□ -1.78
CHD1-209ENST00000512844 MDH2P40926 338 aaKnown RBP3.96□□□□□ -1.78
CHD1-209ENST00000512844 HAND2P61296 217 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms