RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 WFDC11Q8NEX6 87 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 ACMSDQ8TDX5 336 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 INTS12Q96CB8 462 aaKnown RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 KLHL29Q96CT2 875 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 ZNF382Q96SR6 550 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 SLC39A3Q9BRY0 314 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 SERHLQ9NQF3 203 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 EHD3Q9NZN3 535 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 MCM8Q9UJA3 840 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 UTS2RQ9UKP6 389 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 MAPRE3Q9UPY8 281 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 WBP11Q9Y2W2 641 aaKnown RBP11.4□□□□□ -0.58
VEGFA-216ENST00000512683 WIF1Q9Y5W5 379 aa11.4□□□□□ -0.58
VEGFA-216ENST00000512683 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 A0A1W2PPM1 405 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 MANBAO00462 879 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 ZIC3O60481 467 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 PLOD3O60568 738 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TSPAN2O60636 221 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TMCC2O75069 709 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TNFRSF21O75509 655 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TNFSF13O75888 250 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CT45A8P0DMV1 189 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CT45A9P0DMV2 189 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 PYGBP11216 843 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CHN1P15882 459 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TAC1P20366 129 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 ATP5F1P24539 256 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 MPIP34949 423 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 PRKAA2P54646 552 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 DSCR4P56555 118 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CLDN18P56856 261 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 SRYQ05066 204 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 DUSP2Q05923 314 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 HEPACAMQ14CZ8 416 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 ERCC6LQ2NKX8 1250 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CT45A2Q5DJT8 189 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 SH2D5Q6ZV89 423 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 LUZP2Q86TE4 346 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CXorf67Q86X51 503 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 GRAMD2AQ8IUY3 354 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CCDC116Q8IYX3 515 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 C1orf52Q8N6N3 182 aaKnown RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 ADCY4Q8NFM4 1077 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TMBIM1Q969X1 311 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 L3HYPDHQ96EM0 354 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 CNRIP1Q96F85 164 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 SFXN2Q96NB2 322 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 G6PC3Q9BUM1 346 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 GALNT9Q9HCQ5 603 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 GIMAP4Q9NUV9 329 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 SIRT5Q9NXA8 310 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TAS2R9Q9NYW1 312 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 PSMC3IPQ9P2W1 217 aaPredicted RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TBK1Q9UHD2 729 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 EMCNQ9ULC0 261 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 DTX4Q9Y2E6 619 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 TESMINQ9Y4I5 508 aa11.39□□□□□ -0.59
VEGFA-216ENST00000512683 FLNAP21333 2647 aaKnown RBP11.39□□□□□ -0.59
VEGFA-216ENST00000512683 A0A1W2PNV4 684 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 CCDC151A5D8V7 595 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 CTIFO43310 598 aaKnown RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 ULK1O75385 1050 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 SHBGP04278 402 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 HEXAP06865 529 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 GSTA1P08263 222 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 DPP4P27487 766 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 HTR6P50406 440 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 RAE1P78406 368 aaKnown RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 CSTF3Q12996 717 aaKnown RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 GANABQ14697 944 aaKnown RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 EXOSC7Q15024 291 aaKnown RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 RASA2Q15283 850 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 CYP27C1Q4G0S4 372 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 ZNF628Q5EBL2 1059 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 GALNT18Q6P9A2 607 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 CLEC9AQ6UXN8 241 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 GPRIN3Q6ZVF9 776 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 P4HA3Q7Z4N8 544 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 P3H2Q8IVL5 708 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 MEIOBQ8N635 442 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 SIMC1Q8NDZ2 872 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 CAVIN3Q969G5 261 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 STARD4Q96DR4 205 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 C11orf24Q96F05 449 aaPredicted RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 VSTM2LQ96N03 204 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 ADOQ96SZ5 270 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 STOML1Q9UBI4 398 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 HEY2Q9UBP5 337 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 MRTO4Q9UKD2 239 aaKnown RBP11.38□□□□□ -0.59
VEGFA-216ENST00000512683 STK38LQ9Y2H1 464 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 ZNF175Q9Y473 711 aa11.38□□□□□ -0.59
VEGFA-216ENST00000512683 SERTM1A2A2V5 107 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 G3V2L1 256 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 UBFD1O14562 309 aaKnown RBP11.37□□□□□ -0.59
VEGFA-216ENST00000512683 EMC8O43402 210 aa11.37□□□□□ -0.59
VEGFA-216ENST00000512683 SMPD2O60906 423 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms