RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MRPL21Q7Z2W9 205 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 CCDC50Q8IVM0 306 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 IQCKQ8N0W5 287 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 C17orf78Q8N4C9 275 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM217Q8N7C4 229 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 DPH7Q9BTV6 452 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 EBF3Q9H4W6 596 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 CD209Q9NNX6 404 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 RIPK3Q9Y572 518 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM8BA6NDV4 472 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM189-UBE2V1I3L0A0 370 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 ADRB1P08588 477 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 SMIM18P0DKX4 95 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 ATP1B2P14415 290 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 ITGA2P17301 1181 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 HLA-GP17693 338 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 POLR2EP19388 210 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 YWHABP31946 246 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 COILP38432 576 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 PGGT1BP53609 377 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 TSPAN31Q12999 210 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 UBE2V1Q13404 147 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 FOXE3Q13461 319 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 COL9A3Q14050 684 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 EFNB3Q15768 340 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 PSG3Q16557 428 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 KCTD19Q17RG1 926 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 C5orf64Q2M2E5 130 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 C5orf47Q569G3 176 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 PLEKHA7Q6IQ23 1121 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM71Q6P5X7 295 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 IRF2BP2Q7Z5L9 587 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 KMT5CQ86Y97 462 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC5A8Q8N695 610 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 OR10Q1Q8NGQ4 319 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 OR10Z1Q8NGY1 313 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 NETO1Q8TDF5 533 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 CA5BP1Q8WTZ4 195 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 ESR2Q92731 530 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 GPR137Q96N19 417 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 UBL7Q96S82 380 aaPredicted RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 OMDQ99983 421 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 CADM1Q9BY67 442 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 SRRQ9GZT4 340 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC38A1Q9H2H9 487 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 PPP1R3EQ9H7J1 279 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC38A10Q9HBR0 1119 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 DIABLOQ9NR28 239 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 ABT1Q9ULW3 272 aaKnown RBP5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 PALLDQ8WX93 1383 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 EVPLQ92817 2033 aa5.8□□□□□ -1.48
TRAPPC11-209ENST00000512476 AFDNP55196 1824 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 NHSQ6T4R5 1651 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 RREB1Q92766 1687 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ILVBLA1L0T0 632 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 NOTOA8MTQ0 251 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 FOXN1O15353 648 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ATP8B1O43520 1251 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 CST4P01036 141 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ACVR1BP36896 505 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GGCXP38435 758 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 CD79BP40259 229 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 CDX1P47902 265 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 METAP2P50579 478 aaKnown RBP eCLIP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GRIK2Q13002 908 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SELENBP1Q13228 472 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 EXOSC2Q13868 293 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLC15A2Q16348 729 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SYPL1Q16563 259 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ITPRIPL2Q3MIP1 535 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 POM121L1PQ3SYA9 428 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 CYP4Z2PQ8N1L4 340 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 TMEM156Q8N614 296 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ZNF611Q8N823 705 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 BLOC1S5Q8TDH9 187 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ATOH1Q92858 354 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 KAZALD1Q96I82 304 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 CEP170P1Q96L14 293 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 OPALINQ96PE5 141 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 DEFB118Q96PH6 123 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 FMO2Q99518 471 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 PAPOLGQ9BWT3 736 aaKnown RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 DPAGT1Q9H3H5 408 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SLA2Q9H6Q3 261 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 WDR54Q9H977 334 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 SEMA4GQ9NTN9 838 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 TAS2R9Q9NYW1 312 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 STOX2Q9P2F5 926 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 NKX1-2Q9UD57 310 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 IKZF3Q9UKT9 509 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 GINS2Q9Y248 185 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 ZNF831Q5JPB2 1677 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 EMSYQ7Z589 1322 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 INSIG1O15503 277 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 AQP9O43315 295 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 OR10H2O60403 315 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 LDB3O75112 727 aa5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 NADKO95544 446 aaPredicted RBP5.79□□□□□ -1.48
TRAPPC11-209ENST00000512476 PGK1P00558 417 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms