RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PSMA8Q8TAA3 256 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 FAM57AQ8TBR7 257 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ITLN2Q8WWU7 325 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 STON2Q8WXE9 905 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 DIO2Q92813 273 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 HOXB13Q92826 284 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 TP53INP1Q96A56 240 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 TESCQ96BS2 214 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PPCDCQ96CD2 204 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 NTNG2Q96CW9 530 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ELP4Q96EB1 424 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 C16orf58Q96GQ5 468 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 VSTM2LQ96N03 204 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PHF12Q96QT6 1004 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 DOHHQ9BU89 302 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CCDC28BQ9BUN5 200 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 NXF5Q9H1B4 397 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 RUBCNLQ9H714 662 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 PROK2Q9HC23 129 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SH2D2AQ9NP31 389 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 GPATCH2Q9NW75 528 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ALKBH4Q9NXW9 302 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 TUBA8Q9NY65 449 aaPredicted RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 COQ3Q9NZJ6 369 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 FLRT3Q9NZU0 649 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 CNIH4Q9P003 139 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 SLAMF8Q9P0V8 285 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 NTMQ9P121 344 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 B4GALT7Q9UBV7 327 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ACAD8Q9UKU7 415 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 ENTPD4Q9Y227 616 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 EIF3LQ9Y262 564 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 WBP11Q9Y2W2 641 aaKnown RBP8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 KCNE3Q9Y6H6 103 aa8.03□□□□□ -1.12
PDLIM5-213ENST00000509357 A0A0G2JND7 137 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 E9PLN8 166 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 HNRNPRO43390 633 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PLOD3O60568 738 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 IGKV1D-16P01601 117 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 VIMP08670 466 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FBXO45P0C2W1 286 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 ACP2P11117 423 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PRPS1L1P21108 318 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MASP1P48740 699 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MAN2A2P49641 1150 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FBXW4P57775 412 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 GNGT1P63211 74 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MLC1Q15049 377 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 TOMM20Q15388 145 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PGS1Q32NB8 556 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PAGE3Q5JUK9 113 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 TMEM211Q6ICI0 200 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 ZNF585AQ6P3V2 769 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 OLIG3Q7RTU3 272 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FGD2Q7Z6J4 655 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 ZAR1Q86SH2 424 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PACS2Q86VP3 889 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 RETREG3Q86VR2 466 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PRR22Q8IZ63 422 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM9CQ8IZT9 166 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FBXW8Q8N3Y1 598 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 OR8J2Q8NGG1 315 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 OR5M9Q8NGP3 310 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 OR5AK3PQ8NH89 298 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FBXO30Q8TB52 745 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PAQR8Q8TEZ7 354 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 CA5BP1Q8WTZ4 195 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MARVELD3Q96A59 401 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 VPS33AQ96AX1 596 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MTERF3Q96E29 417 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FAM120BQ96EK7 910 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 BBS4Q96RK4 519 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 VKORC1Q9BQB6 163 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 DUSP26Q9BV47 211 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 RTN4RQ9BZR6 473 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 DPY30Q9C005 99 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 BHLHE41Q9C0J9 482 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 TP63Q9H3D4 680 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FOLH1BQ9HBA9 442 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 ZFP64Q9NPA5 681 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 CHST11Q9NPF2 352 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MIEF1Q9NQG6 463 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 RYDENQ9NUL5 291 aaKnown RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 FBXO34Q9NWN3 711 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 PRODH2Q9UF12 536 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 C19orf53Q9UNZ5 99 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 KLF2Q9Y5W3 355 aaPredicted RBP8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 NPFFR2Q9Y5X5 522 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 NINQ8N4C6 2090 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 MYO7BQ6PIF6 2116 aa8.02□□□□□ -1.13
PDLIM5-213ENST00000509357 A0A087WV62 115 aa8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 TRGV5A0A0B4J1U4 118 aa8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 GXYLT2A0PJZ3 443 aa8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 BCKDKO14874 412 aa8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 UBDO15205 165 aa8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 TRAPPC6AO75865 159 aa8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 BCAS2O75934 225 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 GLSO94925 669 aaPredicted RBP8.01□□□□□ -1.13
PDLIM5-213ENST00000509357 CLDN14O95500 239 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms