RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 FRMD7Q6ZUT3 714 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 LARP4Q71RC2 724 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 IFNEQ86WN2 208 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CNPY4Q8N129 248 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CCNYL1Q8N7R7 359 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 OR4N2Q8NGD1 307 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 RDH11Q8TC12 318 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 FAM222BQ8WU58 562 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 NINJ1Q92982 152 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 EFHD2Q96C19 240 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 LRRC46Q96FV0 321 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 STMN4Q9H169 189 aaPredicted RBP11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CXXC4Q9H2H0 198 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 TNFRSF12AQ9NP84 129 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 MYNNQ9NPC7 610 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 TAS2R10Q9NYW0 307 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 SENP1Q9P0U3 644 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 DCDC2Q9UHG0 476 aa11.81□□□□□ -0.52
HMGCS1-205ENST00000508319 CLCA1A8K7I4 914 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 MYO1GB0I1T2 1018 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 PSMG1O95456 288 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 PROCP04070 461 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 SHBGP04278 402 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 JUNP05412 331 aaKnown RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 TMIGD3P0DMS9 266 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 MYL2P10916 166 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 GRK2P25098 689 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 MPIP34949 423 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 OPRM1P35372 400 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 KRT20P35900 424 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 MC3RP41968 323 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 NCBP2P52298 156 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 DGKQP52824 942 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 PNLIPRP2P54317 469 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 CLDN18P56856 261 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 SORDQ00796 357 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 ZNF155Q12901 538 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 FOXF2Q12947 444 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 SPDYAQ5MJ70 313 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 OR5M10Q6IEU7 315 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 FAM71E1Q6IPT2 247 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 TMEM107Q6UX40 140 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 TRIM46Q7Z4K8 759 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 CDC20BQ86Y33 519 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 SLC44A2Q8IWA5 706 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 TRIM42Q8IWZ5 723 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 LRRN4CLQ8ND94 238 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 CDC26Q8NHZ8 85 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 CCDC126Q96EE4 140 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 RMND5BQ96G75 393 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 ZFP3Q96NJ6 502 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 BBS4Q96RK4 519 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 UCN2Q96RP3 112 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 CCM2LQ9NUG4 571 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 TAS2R9Q9NYW1 312 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 ST6GALNAC2Q9UJ37 374 aa11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 POLR3HQ9Y535 204 aaPredicted RBP11.8□□□□□ -0.52
HMGCS1-205ENST00000508319 A0A087WV62 115 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 TUBAL3A6NHL2 446 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 PLOD2O00469 737 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 ZIC3O60481 467 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 PLIN3O60664 434 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 COQ9O75208 318 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 RSL1D1O76021 490 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 RCBTB2O95199 551 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 ZNF708P17019 499 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 EVI2BP34910 448 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 STARP49675 285 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 B3GALT5-AS1P59052 145 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 SRYQ05066 204 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 C2orf80Q0P641 193 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 DAZAP2Q15038 168 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 IMPG1Q17R60 797 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 AAGABQ6PD74 315 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 GCNT2Q8N0V5 402 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 OR2L13Q8N349 312 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 FAM76AQ8TAV0 307 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 SFXN2Q96NB2 322 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 TM9SF2Q99805 663 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 FOXC2Q99958 501 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 SFXN3Q9BWM7 321 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 GLIPR2Q9H4G4 154 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 MIEF1Q9NQG6 463 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 TAS2R7Q9NYW3 318 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 DKKL1Q9UK85 242 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 C19orf53Q9UNZ5 99 aaPredicted RBP11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 MRPS18CQ9Y3D5 142 aaKnown RBP11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 OR10H1Q9Y4A9 318 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 CCL27Q9Y4X3 112 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 PCNX3Q9H6A9 2034 aa11.79□□□□□ -0.52
HMGCS1-205ENST00000508319 H3BQF6 201 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 UPK1AO00322 258 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 HCRTR2O43614 444 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 SLITRK5O94991 958 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 EPXP11678 715 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 TCEA1P23193 301 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 CHMP24386 653 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 DPP4P27487 766 aa11.78□□□□□ -0.52
HMGCS1-205ENST00000508319 NTSP30990 170 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms