RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 DPPA2Q7Z7J5 298 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 HAPLN4Q86UW8 402 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 PDIK1LQ8N165 341 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 LNX2Q8N448 690 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 PAPD5Q8NDF8 572 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SDR9C7Q8NEX9 313 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 NEK7Q8TDX7 302 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SETD7Q8WTS6 366 aaKnown RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 ANKRD36BP1Q96IX9 119 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 COX4I2Q96KJ9 171 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TSSK1BQ9BXA7 367 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 DUSP16Q9BY84 665 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 DUSP15Q9H1R2 295 aaPredicted RBP6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 SERTAD3Q9UJW9 196 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 NRKQ7Z2Y5 1582 aa6.97□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEM213A2RRL7 107 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 SRRM3A6NNA2 597 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 XRCC2O43543 280 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 C9P02748 559 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 CETPP11597 493 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 CYP11B1P15538 503 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 HIBADHP31937 336 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 KIR3DL1P43629 444 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 LIMK2P53671 638 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 PEX3P56589 373 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNHIT3Q15649 155 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 ZBTB6Q15916 424 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 HLA-DQA1Q5Y7H0 255 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 CAPN13Q6MZZ7 669 aaPredicted RBP6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 VWA1Q6PCB0 445 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 OR51G2Q8NGK0 314 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 SAP25Q8TEE9 199 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 UTP23Q9BRU9 249 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 ELOVL1Q9BW60 279 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 MAP1LC3CQ9BXW4 147 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 SEMA4GQ9NTN9 838 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 GID8Q9NWU2 228 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 THUMPD1Q9NXG2 353 aaKnown RBP6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 ING3Q9NXR8 418 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 RBPJLQ9UBG7 517 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 ICKQ9UPZ9 632 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 PPP1R3CQ9UQK1 317 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 DHRS7Q9Y394 339 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 NR2E1Q9Y466 385 aa6.96□□□□□ -1.29
PDGFRA-206ENST00000508170 RNF222A6NCQ9 220 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 MS4A18H0YCH9 400 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 TMEM189-UBE2V1I3L0A0 370 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 CLOCKO15516 846 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 B3GAT3O94766 335 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 VAPBO95292 243 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 MT-CYBP00156 380 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 GH2P01242 217 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 CD63P08962 238 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ICAM2P13598 275 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ME2P23368 584 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 AHRP35869 848 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 CDX1P47902 265 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC6A8P48029 635 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 LHX1P48742 406 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 NUMBP49757 651 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 RPL14P50914 215 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 IL13RA1P78552 427 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 BNIP2Q12982 314 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ORC2Q13416 577 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 TMED2Q15363 201 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 SLC9A3R2Q15599 337 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 TNXAQ16473 311 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 GUK1Q16774 197 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 C6orf141Q5SZD1 244 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 IRAK1BP1Q5VVH5 260 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 REEP3Q6NUK4 255 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 C3P1Q6ZMU1 363 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 S100A7AQ86SG5 101 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF554Q86TJ5 538 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 GALNT16Q8N428 558 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 OR5T2Q8NGG2 359 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 OR10Q1Q8NGQ4 319 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 MYDGFQ969H8 173 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 FAM131CQ96AQ9 280 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 BIRC7Q96CA5 298 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 C12orf42Q96LP6 360 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 GSTO2Q9H4Y5 243 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ABCB9Q9NP78 766 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 TRIM36Q9NQ86 728 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 GPR173Q9NS66 373 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 RNF146Q9NTX7 359 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 NECAP2Q9NVZ3 263 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 NKX1-2Q9UD57 310 aaPredicted RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 NXT1Q9UKK6 140 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ZFR2Q9UPR6 939 aaKnown RBP6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 ZDHHC9Q9Y397 364 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 MMACHCQ9Y4U1 282 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 AUP1Q9Y679 476 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 RFX7Q2KHR2 1363 aa6.96□□□□□ -1.3
PDGFRA-206ENST00000508170 EMSYQ7Z589 1322 aa6.95□□□□□ -1.3
PDGFRA-206ENST00000508170 SNED1Q8TER0 1413 aa6.95□□□□□ -1.3
PDGFRA-206ENST00000508170 ANKUB1A6NFN9 424 aa6.95□□□□□ -1.3
PDGFRA-206ENST00000508170 ZNF487B1APH4 448 aa6.95□□□□□ -1.3
PDGFRA-206ENST00000508170 ST6GAL1P15907 406 aa6.95□□□□□ -1.3
PDGFRA-206ENST00000508170 PGAM1P18669 254 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms