RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ARL14Q8N4G2 192 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 TBCKQ8TEA7 893 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 TAF4BQ92750 862 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 ART4Q93070 314 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 RBM18Q96H35 190 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 PSMB7Q99436 277 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 RPP25Q9BUL9 199 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 CARD6Q9BX69 1037 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 VAT1LQ9HCJ6 419 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 AGPAT5Q9NUQ2 364 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 FAM120CQ9NX05 1096 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 DUS2Q9NX74 493 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 RAI14Q9P0K7 980 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 PRODH2Q9UF12 536 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 B9D1Q9UPM9 204 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 DHRS7Q9Y394 339 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.65□□□□□ -1.99
LSM6-205ENST00000507449 U3KQV3 271 aa2.65□□□□□ -1.99
LSM6-205ENST00000507449 A0A087WZY1 265 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 CCT8L1PA6NM43 557 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 E9PAM4 449 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 H3BTX0 84 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 BCL2L11O43521 198 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 TSC22D2O75157 780 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 AK1P00568 194 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 SNRPCP09234 159 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 ALPIP09923 528 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 IDSP22304 550 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 CYP2F1P24903 491 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 MDH1P40925 334 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 BRCC3P46736 316 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 TRPC1P48995 793 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 IST1P53990 364 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 RPS6P62753 249 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 PRKCEQ02156 737 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 SCGB2A2Q13296 93 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 RUNX3Q13761 415 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 CRMP1Q14194 572 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 PPP1R3AQ16821 1122 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 SLC22A6Q4U2R8 563 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 DNAJC21Q5F1R6 531 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 SEL1L3Q68CR1 1132 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 FBXL22Q6P050 247 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 ARSKQ6UWY0 536 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 BTNL3Q6UXE8 466 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 Q7L0L9 218 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 LPCAT2Q7L5N7 544 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 ERC1Q8IUD2 1116 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 CBWD2Q8IUF1 395 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 GRAMD2AQ8IUY3 354 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 MISPQ8IVT2 679 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 EFCAB13Q8IY85 973 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 GCNT2Q8N0V5 402 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 RFESDQ8TAC1 157 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 TYMSOSQ8TAI1 123 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 RSPH1Q8WYR4 309 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 VSTM2LQ96N03 204 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 PYGO2Q9BRQ0 406 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 TBC1D10AQ9BXI6 508 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 MRPL13Q9BYD1 178 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 RPAP3Q9H6T3 665 aaPredicted RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 COQ10BQ9H8M1 238 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 RPS10P5Q9NQ39 176 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 POLE3Q9NRF9 147 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 KLRF1Q9NZS2 232 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 ATP6V1HQ9UI12 483 aa2.64□□□□□ -1.99
LSM6-205ENST00000507449 ISY1Q9ULR0 285 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 EXOSC1Q9Y3B2 195 aaKnown RBP2.64□□□□□ -1.99
LSM6-205ENST00000507449 ESYT2A0FGR8 921 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 ZSCAN5CA6NGD5 496 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 C11orf98E9PRG8 122 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 EFNA2O43921 213 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 GPRIN2O60269 458 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 OR4F21O95013 312 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 JCHAINP01591 159 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 CHRNA1P02708 482 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 GSTT2P0CG29 244 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 GSTT2BP0CG30 244 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 LAMP1P11279 417 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 XRCC1P18887 633 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 DPP4P27487 766 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 ACAA2P42765 397 aaKnown RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 ALDH3B2P48448 385 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 ARHGDIBP52566 201 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 SLC8A3P57103 927 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 ERVPABLB-1P60509 514 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 PAX2Q02962 417 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 RAB35Q15286 201 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 TRIP10Q15642 601 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 UBE2V2Q15819 145 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 C15orf32Q32M92 178 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 CNPY1Q3B7I2 92 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 TTC31Q49AM3 519 aaPredicted RBP2.63□□□□□ -1.99
LSM6-205ENST00000507449 LINC01620Q4KN68 170 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 HIGD2BQ4VC39 106 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 ASPHD2Q6ICH7 369 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 NIPAL3Q6P499 406 aa2.63□□□□□ -1.99
LSM6-205ENST00000507449 TMEM184AQ6ZMB5 413 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms