RNA–Protein interactions for RNA: ENST00000506154.1

NEDD4-205, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 6,751 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-205ENST00000506154 GLT1D1Q96MS3 346 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SPATA33Q96N06 139 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 GNRHR2Q96P88 292 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 TMEM208Q9BTX3 173 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 DDA1Q9BW61 102 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 FUNDC2Q9BWH2 189 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 MTIF3Q9H2K0 278 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 EFCAB1Q9HAE3 211 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 FBXO6Q9NRD1 293 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 NINJ2Q9NZG7 142 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 RUVBL2Q9Y230 463 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 C2orf16Q68DN1 1984 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 PCM1Q15154 2024 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SLC5A10A0PJK1 596 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 OR6C70A6NIJ9 312 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 B4DXG7 233 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CDC7O00311 574 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 NRP1O14786 923 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SLC16A4O15374 487 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 PHGDHO43175 533 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SUV39H1O43463 412 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 EIF4E2O60573 245 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 MED6O75586 246 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 B3GAT3O94766 335 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CGAP01215 116 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 GNAO1P09471 354 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CA4P22748 312 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 POU1F1P28069 291 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SRSF5Q13243 272 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 ENPP2Q13822 863 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CDNFQ49AH0 187 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 KLHL12Q53G59 568 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 ARMC12Q5T9G4 340 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 TAF2Q6P1X5 1199 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 BHLHB9Q6PI77 547 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 RBMS3Q6XE24 437 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SKA3Q8IX90 412 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 MRPL41Q8IXM3 137 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 C9orf40Q8IXQ3 194 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 KIAA2013Q8IYS2 634 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CPEB3Q8NE35 698 aaKnown RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CPT1BQ92523 772 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 C1GALT1C1Q96EU7 318 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 MEGF10Q96KG7 1140 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CPNE1Q99829 537 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 ZFYVE21Q9BQ24 234 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CCDC3Q9BQI4 270 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 RSPO3Q9BXY4 272 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 BARHL1Q9BZE3 327 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CSNK1G1Q9HCP0 422 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 KLHL28Q9NXS3 571 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 ERVK-18Q9QC07 812 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 SIX4Q9UIU6 781 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 KCNS2Q9ULS6 477 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 GABRQQ9UN88 632 aa2.13□□□□□ -2.07
NEDD4-205ENST00000506154 TMEM184BQ9Y519 407 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-205ENST00000506154 CENPXA8MT69 81 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 M0QZK8 103 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SULT1C2O00338 296 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PRICKLE3O43900 615 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 C9P02748 559 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 HKR1P10072 659 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GFAPP14136 432 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 KCNE1P15382 129 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 OTX1P32242 354 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CSNK1EP49674 416 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RBP2P50120 134 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DUSP2Q05923 314 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TNFRSF9Q07011 255 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TNFAIP1Q13829 316 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PTK6Q13882 451 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 IL13RA2Q14627 380 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SNAPC1Q16533 368 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 FSCN1Q16658 493 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DCAF10Q5QP82 559 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 VASNQ6EMK4 673 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 IL27RAQ6UWB1 636 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SLC36A4Q6YBV0 504 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MIER3Q7Z3K6 550 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ARID3BQ8IVW6 561 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SLC35F3Q8IY50 421 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 GDPD1Q8N9F7 314 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 NLGN4YQ8NFZ3 816 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PUM2Q8TB72 1066 aaKnown RBP eCLIP2.12□□□□□ -2.079e-9■■■■■ 41.5
NEDD4-205ENST00000506154 NANPQ8TBE9 248 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 BPIFB1Q8TDL5 484 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 USP13Q92995 863 aaPredicted RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 FAF2Q96CS3 445 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 C3orf30Q96M34 536 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RILPQ96NA2 401 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MMP19Q99542 508 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 MARVELD1Q9BSK0 173 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ABCG8Q9H221 673 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 CPVLQ9H3G5 476 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 RPRD1BQ9NQG5 326 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 TAS2R10Q9NYW0 307 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 PEF1Q9UBV8 284 aaKnown RBP2.12□□□□□ -2.07
NEDD4-205ENST00000506154 ZNF229Q9UJW7 825 aa2.12□□□□□ -2.07
NEDD4-205ENST00000506154 DRG1Q9Y295 367 aaKnown RBP2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms