RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 SUCLG1P53597 346 aaKnown RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CTBP2P56545 445 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CLDN15P56746 228 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CLDN20P56880 219 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CORO7P57737 925 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 EEFSECP57772 596 aaKnown RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 B3GALT5-AS1P59052 145 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 DUSP2Q05923 314 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 DLG1Q12959 904 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 EFR3AQ14156 821 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 FRG1Q14331 258 aaKnown RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 FGFBP1Q14512 234 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 TSC22D1Q15714 1073 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 ZKSCAN8Q15776 578 aaPredicted RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 BCL2A1Q16548 175 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 PFKFB4Q16877 469 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 TRMT12Q53H54 448 aaKnown RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 SGO1Q5FBB7 561 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 SH2D4BQ5SQS7 431 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CCNYL2Q5T2Q4 361 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 LGSNQ5TDP6 509 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 LIPJQ5W064 366 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 TTC19Q6DKK2 380 aaPredicted RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 SH2D5Q6ZV89 423 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 LARP4Q71RC2 724 aaKnown RBP eCLIP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 FAM214BQ7L5A3 538 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 GOLGA7Q7Z5G4 137 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 TBC1D1Q86TI0 1168 aaPredicted RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 ISCA2Q86U28 154 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CTAGE3PQ8IX95 158 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 SLC35F6Q8N357 371 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CEP112Q8N8E3 955 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 RAB3IL1Q8TBN0 382 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 ACTRT1Q8TDG2 376 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 KCTD4Q8WVF5 259 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 CDKL2Q92772 493 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 NEUROG1Q92886 237 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 GFM2Q969S9 779 aaKnown RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 HS6ST2Q96MM7 605 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 ATOH8Q96SQ7 321 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 SERPINI1Q99574 410 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 TACO1Q9BSH4 297 aaKnown RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 MCMBPQ9BTE3 642 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 NTMT1Q9BV86 223 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 AMBRA1Q9C0C7 1298 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 SLCO5A1Q9H2Y9 848 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 DSN1Q9H410 356 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 MED11Q9P086 117 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 PRODH2Q9UF12 536 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 LIPT1Q9Y234 373 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 EMC9Q9Y3B6 208 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 RNF11Q9Y3C5 154 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 JRKLQ9Y4A0 524 aa6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 MAGED1Q9Y5V3 778 aaPredicted RBP6.19□□□□□ -1.42
NPIPB3-203ENST00000504841 C1orf226A1L170 272 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 SHISA8B8ZZ34 492 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 H0YIV9 168 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 EIF1AYO14602 144 aaKnown RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 TO15178 435 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 SSX4O60224 188 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 GPRIN2O60269 458 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 TMCC2O75069 709 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 TNFRSF21O75509 655 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 SEC31AO94979 1220 aaKnown RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 SEMA3DO95025 777 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 SIX3O95343 332 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ESRRBO95718 433 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ATP1B1P05026 303 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 LTA4HP09960 611 aaKnown RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 FAM157CP0CG43 387 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 FCGR2AP12318 317 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 MTHFD2P13995 350 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 CSNK2A2P19784 350 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 PTNP21246 168 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 PPICP45877 212 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 EIF1AXP47813 144 aaKnown RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 RFX3P48380 749 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 EMDP50402 254 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 DSCR4P56555 118 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 RPS3AP61247 264 aaKnown RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 IRF9Q00978 393 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 DR1Q01658 176 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ZNF844Q08AG5 666 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 MGAT2Q10469 447 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 MAP4K2Q12851 820 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ZNF155Q12901 538 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 GTF2H2Q13888 395 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ETFDHQ16134 617 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ERCC6LQ2NKX8 1250 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 CTU2Q2VPK5 515 aaKnown RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 ADAM5Q6NVV9 412 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 SLC48A1Q6P1K1 146 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 GTF2H2CQ6P1K8 395 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 STAC2Q6ZMT1 411 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 COMMD6Q7Z4G1 85 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 GAS2L3Q86XJ1 694 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 GBP7Q8N8V2 638 aaPredicted RBP6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 KBTBD8Q8NFY9 601 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 OR2M3Q8NG83 312 aa6.18□□□□□ -1.42
NPIPB3-203ENST00000504841 OR6K3Q8NGY3 331 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms