RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	PIK3R3	Q92569	461 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	TMEM125	Q96AQ2	219 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	MOAP1	Q96BY2	351 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZNF524	Q96C55	264 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	OTUB1	Q96FW1	271 aa	Predicted RBP	4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	ITCH	Q96J02	903 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	ART5	Q96L15	291 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR7D2	Q96RA2	312 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	STAC	Q99469	402 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	SDF2	Q99470	211 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	BARD1	Q99728	777 aa	Known RBP	4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	KLHDC3	Q9BQ90	382 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	SLC35A5	Q9BS91	424 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	ACTRT3	Q9BYD9	372 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZNF350	Q9GZX5	532 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	SLC38A1	Q9H2H9	487 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	CDCP1	Q9H5V8	836 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	IL1RL2	Q9HB29	575 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	DEPP	Q9NTK1	212 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	GIMAP4	Q9NUV9	329 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	DDX18	Q9NVP1	670 aa	Known RBP	4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	CMTM6	Q9NX76	183 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	TAS2R1	Q9NYW7	299 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	FLRT3	Q9NZU0	649 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	CD300A	Q9UGN4	299 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	TUBD1	Q9UJT1	453 aa		4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	LEF1	Q9UJU2	399 aa	Predicted RBP	4.55	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZNF407	Q9C0G0	2248 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR6C70	A6NIJ9	312 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788		A8MVJ9	347 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CLIC1	O00299	241 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	WWP2	O00308	870 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ACOX3	O15254	700 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	DNAJA2	O60884	412 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ADAM11	O75078	769 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	BCAS1	O75363	584 aa	Predicted RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	WISP2	O76076	250 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	UBOX5	O94941	541 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CHRM4	P08173	479 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	FAM87A	P0C7U9	286 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ETFA	P13804	333 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	NAGA	P17050	411 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	RPS4Y1	P22090	263 aa	Known RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ITGA3	P26006	1051 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	MAGEA8	P43361	318 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TNFSF10	P50591	281 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CCL11	P51671	97 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	NR0B1	P51843	470 aa	Known RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	MTPN	P58546	118 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	MRPS22	P82650	360 aa	Known RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	PRR5	P85299	388 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TP53BP2	Q13625	1128 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	RAPSN	Q13702	412 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TUBA3C	Q13748	450 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CYLC2	Q14093	348 aa	Predicted RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	NNAT	Q16517	81 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	MAPK14	Q16539	360 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ST3GAL2	Q16842	350 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CPEB4	Q17RY0	729 aa	Known RBP eCLIP	4.54	□□□□□ -1.68	4e-6	■□□□□ 8.6
LMNB1-208	ENST00000504788	ARHGAP11B	Q3KRB8	267 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	BROX	Q5VW32	411 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TYW3	Q6IPR3	259 aa	Known RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TUBA3E	Q6PEY2	450 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	C19orf48	Q6RUI8	117 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ISLR2	Q6UXK2	745 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	FRRS1	Q6ZNA5	592 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788		Q6ZS92	163 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	DHDDS	Q86SQ9	333 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	COMTD1	Q86VU5	262 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	SLC15A4	Q8N697	577 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	BCORP1	Q8N888	145 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	RBM15B	Q8NDT2	890 aa	Known RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CATSPER1	Q8NEC5	780 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	VPS37A	Q8NEZ2	397 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR8J3	Q8NGG0	315 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR4C3	Q8NH37	302 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	DNAJB8	Q8NHS0	232 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	PNPT1	Q8TCS8	783 aa	Known RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	SLC38A5	Q8WUX1	472 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	DIO2	Q92813	273 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	CDS1	Q92903	461 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	RAB8B	Q92930	207 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	MAL2	Q969L2	176 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ROPN1L	Q96C74	230 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	SPACA9	Q96E40	222 aa	Predicted RBP	4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	HSPBAP1	Q96EW2	488 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	WBP1	Q96G27	269 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	SCMH1	Q96GD3	660 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	NODAL	Q96S42	347 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	ZBTB18	Q99592	522 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	HES7	Q9BYE0	225 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	DEFB126	Q9BYW3	111 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	C1orf21	Q9H246	121 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	OR51I1	Q9H343	314 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TMEM38A	Q9H6F2	299 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	RMND5A	Q9H871	391 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	C3orf14	Q9HBI5	128 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	GPR83	Q9NYM4	423 aa		4.54	□□□□□ -1.68
LMNB1-208	ENST00000504788	TMEM181	Q9P2C4	612 aa		4.54	□□□□□ -1.68

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