RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 SEMA4CQ9C0C4 833 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 QRSL1Q9H0R6 528 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 OR10A5Q9H207 317 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 ABCG2Q9UNQ0 655 aa9.64□□□□□ -0.87
TPM3-217ENST00000504663 SAMD4AQ9UPU9 718 aaKnown RBP9.64□□□□□ -0.87
TPM3-217ENST00000504663 FAM149AA5PLN7 773 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 TMEM200CA6NKL6 621 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SLC30A4O14863 429 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 ACOX3O15254 700 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 IFNA16P05015 189 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 GUSBP08236 651 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 ALOX5P09917 674 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 ETS2P15036 469 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 F8A1P23610 371 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SLC5A2P31639 672 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 TRHRP34981 398 aaPredicted RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 KCNJ5P48544 419 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 PGDP52209 483 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 CRISP3P54108 245 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SELENOWP63302 87 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 OCA2Q04671 838 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 TARDBPQ13148 414 aaKnown RBP eCLIP9.63□□□□□ -0.87
TPM3-217ENST00000504663 PCOLCEQ15113 449 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 NSDHLQ15738 373 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 NPTX1Q15818 432 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 MAPK14Q16539 360 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SFT2D3Q587I9 215 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 C3orf38Q5JPI3 329 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 INTS11Q5TA45 600 aaKnown RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 MFSD4BQ5TF39 518 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 MLIPQ5VWP3 458 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 LPCAT4Q643R3 524 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 FAAH2Q6GMR7 532 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 DESI1Q6ICB0 168 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 PIWIL3Q7Z3Z3 882 aaKnown RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 TMEM179BQ7Z7N9 219 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 HMGN2P46Q86SG4 172 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 AMIGO2Q86SJ2 522 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 ZNF605Q86T29 641 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SLC44A2Q8IWA5 706 aaPredicted RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 OR1N1Q8NGS0 311 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 ADAMTS15Q8TE58 950 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 CT55Q8WUE5 264 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SLC9A6Q92581 669 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 MR1Q95460 341 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 DOHHQ9BU89 302 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 BTBD2Q9BX70 525 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 B3GNT4Q9C0J1 378 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 SLC7A5P2Q9GIP4 190 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 DLL3Q9NYJ7 618 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 C6orf203Q9P0P8 240 aaPredicted RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 C3orf18Q9UK00 162 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 ANGPTL2Q9UKU9 493 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 AURKCQ9UQB9 309 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 LIPT1Q9Y234 373 aa9.63□□□□□ -0.87
TPM3-217ENST00000504663 GPR55Q9Y2T6 319 aaPredicted RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 CNOT1A5YKK6 2376 aaKnown RBP9.63□□□□□ -0.87
TPM3-217ENST00000504663 A0A0G2JPF8 293 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 SYNDIG1LA6NDD5 238 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 DUXAA6NLW8 204 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 HNRNPCL2B2RXH8 293 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 HNRNPCL3B7ZW38 293 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 DLL1O00548 723 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 SOCS6O14544 535 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 HNRNPRO43390 633 aaKnown RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 BRINP1O60477 761 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 ZNF354AO60765 605 aaPredicted RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 BCAS1O75363 584 aaPredicted RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 KCNK2O95069 426 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 STAMBPO95630 424 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 ZNF682O95780 498 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 BAG2O95816 211 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 HEXBP07686 556 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 JMJD7P0C870 316 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 HNRNPCL4P0DMR1 293 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 NR2F1P10589 423 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 COX6A1P12074 109 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 CEACAM1P13688 526 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 GABRA3P34903 492 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 ANXA11P50995 505 aaKnown RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 EMP2P54851 167 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 SESN3P58005 492 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 NRF1Q16656 503 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 CYP27C1Q4G0S4 372 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 DHRS4L2Q6PKH6 230 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 TMPRSS12Q86WS5 348 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 COX18Q8N8Q8 333 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 SMYD1Q8NB12 490 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 PLPP7Q8NBV4 271 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 MORN4Q8NDC4 146 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 OR2Y1Q8NGV0 311 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 PHF10Q8WUB8 498 aaKnown RBP9.62□□□□□ -0.87
TPM3-217ENST00000504663 ADAMTS14Q8WXS8 1223 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 C8orf44Q96CB5 159 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 SLC46A1Q96NT5 459 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 COL21A1Q96P44 957 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 ARHGDIGQ99819 225 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 CRB3Q9BUF7 120 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 UGT2B28Q9BY64 529 aa9.62□□□□□ -0.87
TPM3-217ENST00000504663 OR8D2Q9GZM6 311 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms