RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 FCGR2CP31995 323 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 CCT6AP40227 531 aaKnown RBP4.61□□□□□ -1.67
NIPBL-203ENST00000503274 FRKP42685 505 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-203ENST00000503274 PTGER3P43115 390 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 NAMPTP43490 491 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 ATP4BP51164 291 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 CRYBA2P53672 197 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 SRPXP78539 464 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 GPR50Q13585 617 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 MEP1BQ16820 701 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 LIN9Q5TKA1 542 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 ZNF776Q68DI1 518 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-203ENST00000503274 SPINK14Q6IE38 97 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 CATSPER3Q86XQ3 398 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 CDC20BQ86Y33 519 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 OR7G3Q8NG95 312 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 RFT1Q96AA3 541 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 CCM2Q9BSQ5 444 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 TRIM7Q9C029 511 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 SLC39A8Q9C0K1 460 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 NXF3Q9H4D5 531 aaKnown RBP4.61□□□□□ -1.67
NIPBL-203ENST00000503274 JPT2Q9H910 190 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 VIPAS39Q9H9C1 493 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 XPNPEP1Q9NQW7 623 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 FBXL5Q9UKA1 691 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 HES2Q9Y543 173 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 MYO15AQ9UKN7 3530 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 GVINP1Q7Z2Y8 2422 aa4.61□□□□□ -1.67
NIPBL-203ENST00000503274 DMDP11532 3685 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 A0A1W2PRQ8 180 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CCDC162PA2VCL2 907 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 SERINC4A6NH21 518 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CCDC169A6NNP5 214 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 H0YCG3 227 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 P2RX6O15547 441 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 B4GALT5O43286 388 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 LETM1O95202 739 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 FGF19O95750 216 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 HOXD4P09016 255 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CD1DP15813 335 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 ITIH1P19827 911 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 RPL9P32969 192 aaKnown RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 C3AR1Q16581 482 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 KNOP1Q1ED39 458 aaKnown RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 ATF7IP2Q5U623 682 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 NHLRC1Q6VVB1 395 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 GBP6Q6ZN66 633 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 OTOAQ7RTW8 1153 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 KCNMB4Q86W47 210 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CARM1Q86X55 608 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CCDC83Q8IWF9 413 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 AQP12AQ8IXF9 295 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 TOMM40LQ969M1 308 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 PSMB7Q99436 277 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 HNRNPABQ99729 332 aaKnown RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 TCHPQ9BT92 498 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 TIPINQ9BVW5 301 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CCDC94Q9BW85 323 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 PINK1Q9BXM7 581 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 OCR1Q9BZK8 76 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 STRADBQ9C0K7 418 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 NT5C3AQ9H0P0 336 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CUEDC2Q9H467 287 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 EPS15L1Q9UBC2 864 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 UBQLN2Q9UHD9 624 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 LEF1Q9UJU2 399 aaPredicted RBP4.6□□□□□ -1.67
NIPBL-203ENST00000503274 DUSP12Q9UNI6 340 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 CLUHO75153 1309 aa4.6□□□□□ -1.67
NIPBL-203ENST00000503274 A0A087WWV3 80 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SHISA9B4DS77 424 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 TDRD15B5MCY1 1934 aaKnown RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 ANHXE9PGG2 379 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 H0Y626 953 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 H3BQV1 296 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 B3GAT3O94766 335 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SLC16A8O95907 504 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 C8orf89P0DMQ9 161 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 IL4RP24394 825 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 ACKR3P25106 362 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 U2AF2P26368 475 aaKnown RBP eCLIP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 MARCKSP29966 332 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 HOXA9P31269 272 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 PRPHP41219 470 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 VCPP55072 806 aaKnown RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SLC3A1Q07837 685 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 RIGQ13278 110 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 PSMD5Q16401 504 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 ZNF239Q16600 458 aaKnown RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 KYAT1Q16773 422 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 RFTN2Q52LD8 501 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 PPM1LQ5SGD2 360 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 AGAP6Q5VW22 663 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 C11orf88Q6PI97 169 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SIGLEC15Q6ZMC9 328 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SLC25A42Q86VD7 318 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 NLRP14Q86W24 1093 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 CDR2LQ86X02 465 aaPredicted RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SIAH3Q8IW03 269 aa4.59□□□□□ -1.67
NIPBL-203ENST00000503274 SNRNP40Q96DI7 357 aaKnown RBP4.59□□□□□ -1.67
NIPBL-203ENST00000503274 ALKBH3Q96Q83 286 aaPredicted RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms