RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 OSBPL11Q9BXB4 747 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 BHLHE41Q9C0J9 482 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 ZNF703Q9H7S9 590 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 ACKR4Q9NPB9 350 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 EQTNQ9NQ60 294 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 NTMQ9P121 344 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 ACAD8Q9UKU7 415 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 SNX8Q9Y5X2 465 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 RP1L1Q8IWN7 2480 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 NINQ8N4C6 2090 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 UBR5O95071 2799 aaPredicted RBP11.72□□□□□ -0.53
HSPG2-213ENST00000498495 TENM4Q6N022 2769 aa11.72□□□□□ -0.53
HSPG2-213ENST00000498495 A1L4Q6 167 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 OR14I1A6ND48 311 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PRAMEF25A6NGN4 478 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 LRRC3CA6NJW4 275 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 HMGB1P1B2RPK0 211 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-213ENST00000498495 AQP7O14520 342 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 KLF11O14901 512 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 HCN1O60741 890 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 KCNH1O95259 989 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 C6orf47O95873 294 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 ELAVL4P26378 380 aaKnown RBP11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PTGDSP41222 190 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 RFX3P48380 749 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 CCT3P49368 545 aaKnown RBP11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PRIM2P49643 509 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 C21orf58P58505 322 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 OCRLQ01968 901 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 TIGD3Q6B0B8 471 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 ZCCHC12Q6PEW1 402 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 ANGPTL8Q6UXH0 198 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 SPATA19Q7Z5L4 167 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 MRGPRGQ86SM5 289 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 CD163Q86VB7 1156 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PIWIL2Q8TC59 973 aaKnown RBP11.71□□□□□ -0.53
HSPG2-213ENST00000498495 LRRC8CQ8TDW0 803 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 DYDC1Q8WWB3 177 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 SLC9A6Q92581 669 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 SARAFQ96BY9 339 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 CCDC120Q96HB5 630 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 GALNT9Q9HCQ5 603 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 ZCCHC3Q9NUD5 404 aaKnown RBP11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PLEKHB1Q9UF11 243 aaPredicted RBP11.71□□□□□ -0.53
HSPG2-213ENST00000498495 PCDHGB4Q9UN71 923 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 MEMO1Q9Y316 297 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 LIPGQ9Y5X9 500 aa11.71□□□□□ -0.53
HSPG2-213ENST00000498495 POLEQ07864 2286 aa11.71□□□□□ -0.54
HSPG2-213ENST00000498495 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 GOLGA8QA0A0J9YX86 632 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 GOLGA8OA6NCC3 632 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 E9PLN8 166 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 GOLGA8NF8WBI6 632 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 SDHDO14521 159 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 BCKDKO14874 412 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 CBR3O75828 277 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 NKX2-2O95096 273 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 IL33O95760 270 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 ALOX5P09917 674 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 GP1BBP13224 206 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 CYP4B1P13584 511 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 EPHA3P29320 983 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 TRPC1P48995 793 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 CLK3P49761 638 aaKnown RBP11.7□□□□□ -0.54
HSPG2-213ENST00000498495 SMSP52788 366 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 SPDYE7PQ495Y7 208 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 WLSQ5T9L3 541 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 FNDC7Q5VTL7 733 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 NXNQ6DKJ4 435 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 TMEM211Q6ICI0 200 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 OR4F3Q6IEY1 312 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 OGFOD2Q6N063 350 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 ZNF585AQ6P3V2 769 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 C3P1Q6ZMU1 363 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 CAMKMTQ7Z624 323 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 VPS37AQ8NEZ2 397 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 PIK3R3Q92569 461 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 NTNG2Q96CW9 530 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 FAM120BQ96EK7 910 aaKnown RBP11.7□□□□□ -0.54
HSPG2-213ENST00000498495 GIMAP5Q96F15 307 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 CHMP6Q96FZ7 201 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 C16orf58Q96GQ5 468 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 MS4A4EQ96PG1 132 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 VKORC1Q9BQB6 163 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 YIPF4Q9BSR8 244 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 TP63Q9H3D4 680 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-213ENST00000498495 WDR55Q9H6Y2 383 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-213ENST00000498495 SIRT3Q9NTG7 399 aaPredicted RBP11.7□□□□□ -0.54
HSPG2-213ENST00000498495 ALKBH4Q9NXW9 302 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 C15orf41Q9Y2V0 281 aa11.7□□□□□ -0.54
HSPG2-213ENST00000498495 GTF3C1Q12789 2109 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 GXYLT2A0PJZ3 443 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 SNPHO15079 494 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 HMGN2P05204 90 aaKnown RBP11.69□□□□□ -0.54
HSPG2-213ENST00000498495 HPNP05981 417 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 PTPN6P29350 595 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 MAP3K8P41279 467 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 KIR3DL1P43629 444 aa11.69□□□□□ -0.54
HSPG2-213ENST00000498495 PPP2R2AP63151 447 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms