RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	ARHGAP15	Q53QZ3	475 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MPP7	Q5T2T1	576 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PGBD2	Q6P3X8	592 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CXXC5	Q7LFL8	322 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TMEM185A	Q8NFB2	350 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	OR52N2	Q8NGI0	321 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ZDHHC1	Q8WTX9	485 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TBC1D20	Q96BZ9	403 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MNT	Q99583	582 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WRAP53	Q9BUR4	548 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TMEM168	Q9H0V1	697 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RDH14	Q9HBH5	336 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	LYAR	Q9NX58	379 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MED11	Q9P086	117 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	KCMF1	Q9P0J7	381 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RPS6KB2	Q9UBS0	482 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	LHX6	Q9UPM6	363 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	DAPL1	A0PJW8	107 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FAM25E	A8MYX2	175 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	LINC00587	B1AMM8	73 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SOCS6	O14544	535 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FFAR1	O14842	300 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PRICKLE3	O43900	615 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SDC3	O75056	442 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC2A10	O95528	541 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CLTB	P09497	229 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MMP11	P24347	488 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RAD52	P43351	418 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SGSH	P51688	502 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	RETSAT	Q6NUM9	610 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC36A4	Q6YBV0	504 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WDR20	Q8TBZ3	569 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CLP1	Q92989	425 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TRIM43	Q96BQ3	446 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MS4A4A	Q96JQ5	239 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PTPN18	Q99952	460 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ADAM2	Q99965	735 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WFDC6	Q9BQY6	131 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	AP5M1	Q9H0R1	490 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ISG20L2	Q9H9L3	353 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WSB2	Q9NYS7	404 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	POMT2	Q9UKY4	750 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	AP1M2	Q9Y6Q5	423 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	GLOD5	A6NK44	160 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TBL1X	O60907	577 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	GJB5	O95377	273 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ECD	O95905	644 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WNT1	P04628	370 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	S100A6	P06703	90 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	IL3	P08700	152 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	GNS	P15586	552 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	NFYA	P23511	347 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MMP12	P39900	470 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	THPO	P40225	353 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PSEN2	P49810	448 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TAP2	Q03519	686 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ILK	Q13418	452 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ZNF630	Q2M218	657 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SPIN4	Q56A73	249 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC27A4	Q6P1M0	643 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	LIMS2	Q7Z4I7	341 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FBXO15	Q8NCQ5	510 aa	Predicted RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CNOT9	Q92600	299 aa	Known RBP	10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SEMA4C	Q9C0C4	833 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MAGEH1	Q9H213	219 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	P2RY12	Q9H244	342 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC25A19	Q9HC21	320 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	CAPN10	Q9HC96	672 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	GPATCH2	Q9NW75	528 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	BTNL2	Q9UIR0	455 aa		10.01	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	UBE2QL1	A1L167	161 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MEIS3P1	A6NDR6	274 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	LRRN3	E7EW58	273 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TXNL1	O43396	289 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	NPR2	P20594	1047 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ATP5A1	P25705	553 aa	Known RBP	10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TLE2	Q04725	743 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	STX4	Q12846	297 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLBP	Q14493	270 aa	Known RBP eCLIP	10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	UPP1	Q16831	310 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PLA1A	Q53H76	456 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TCTN3	Q6NUS6	607 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	C19orf48	Q6RUI8	117 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	HORMAD2	Q8N7B1	307 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	PTP4A1	Q93096	173 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SCAMP4	Q969E2	229 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	FCRL1	Q96LA6	429 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SLC38A3	Q99624	504 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	LRRN3	Q9H3W5	708 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ZCCHC4	Q9H5U6	513 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	REEP4	Q9H6H4	257 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	WDR26	Q9H7D7	661 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	TMEM185B	Q9H7F4	350 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	EVA1A	Q9H8M9	152 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	NIT2	Q9NQR4	276 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	MBD1	Q9UIS9	605 aa	Predicted RBP	10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	ASF1A	Q9Y294	204 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	SMIM35	A0A1B0GVV1	85 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	OR2W5	A6NFC9	320 aa		10	□□□□□ -0.81
TRAPPC12-223	ENST00000497597	BET1	O15155	118 aa		10	□□□□□ -0.81

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