RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, human

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CRNKL1-205	ENST00000496549	PTPRN	Q16849	979 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DUOXA1	Q1HG43	343 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MICB	Q29980	383 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ANXA8L1	Q5VT79	327 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DHRS7B	Q6IAN0	325 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TSSK4	Q6SA08	328 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CBLL1	Q75N03	491 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HIST3H2A	Q7L7L0	130 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DNAAF1	Q8NEP3	725 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HIST1H2AC	Q93077	130 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C7orf34	Q96L11	122 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PTCHD1	Q96NR3	888 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GAL3ST4	Q96RP7	486 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GGACT	Q9BVM4	153 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	REG4	Q9BYZ8	158 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SUV39H2	Q9H5I1	410 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CFAP97	Q9P2B7	532 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	KLHL9	Q9P2J3	617 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FBXL4	Q9UKA2	621 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PCDHB11	Q9Y5F2	797 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF541	Q9H0D2	1346 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549		I6L893	689 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR10H2	O60403	315 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TLR5	O60602	858 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	IGHV2-70	P01814	119 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CXCL8	P10145	99 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TXN	P10599	105 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ITGB5	P18084	799 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	AFF3	P51826	1226 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CRISP3	P54108	245 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	HMGCS1	Q01581	520 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OC90	Q02509	493 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ACSM2A	Q08AH3	577 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TDG	Q13569	410 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DGKZ	Q13574	1117 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TTLL4	Q14679	1199 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MAJIN	Q3KP22	176 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TTLL9	Q3SXZ7	439 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PLA1A	Q53H76	456 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ACSM2B	Q68CK6	577 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZC3H14	Q6PJT7	736 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ABI3BP	Q7Z7G0	1075 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SERPINA11	Q86U17	422 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CILP2	Q8IUL8	1156 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GPR135	Q8IZ08	494 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LINC00116	Q8NCU8	138 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR10D4P	Q8NGN7	298 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CSGALNACT1	Q8TDX6	532 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TAAR8	Q969N4	342 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TSGA13	Q96PP4	275 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	AGO3	Q9H9G7	860 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	UNKL	Q9H9P5	680 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	POPDC3	Q9HBV1	291 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MBD1	Q9UIS9	605 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FZD4	Q9ULV1	537 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PCDHB9	Q9Y5E1	797 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	LOC100509620	A0A075B734	347 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	C2orf92	A0A1B0GVN3	265 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SCAMP2	O15127	329 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CDC40	O60508	579 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF432	O94892	652 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	MOCS2	O96007	188 aa	Predicted RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TH	P07101	528 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GK	P32189	559 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RPL3	P39023	403 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PRKX	P51817	358 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CCIN	Q13939	588 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ARHGEF7	Q14155	803 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RBMS2	Q15434	407 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CPSF6	Q16630	551 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ZNF528	Q3MIS6	628 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RAB6C	Q53S08	254 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RNASE10	Q5GAN6	216 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SLC36A4	Q6YBV0	504 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR9Q2	Q8NGE9	314 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR2A12	Q8NGT7	310 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	OR1S1	Q8NH92	325 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GNPDA2	Q8TDQ7	276 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SORCS1	Q8WY21	1168 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FCRL5	Q96RD9	977 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	DERL2	Q9GZP9	239 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RAB6C	Q9H0N0	254 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RHBG	Q9H310	441 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TUBB1	Q9H4B7	451 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	B3GAT2	Q9NPZ5	323 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	TRIM36	Q9NQ86	728 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SIRT7	Q9NRC8	400 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	GULP1	Q9UBP9	304 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PCDHB10	Q9UN67	800 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RCE1	Q9Y256	329 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	RASD1	Q9Y272	281 aa		7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	FARSA	Q9Y285	508 aa	Known RBP	7.75	□□□□□ -1.17
CRNKL1-205	ENST00000496549	CLDN4	O14493	209 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	PHOX2A	O14813	284 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SIGLEC5	O15389	551 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SELENOF	O60613	162 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	SLC34A2	O95436	690 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	F2	P00734	622 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	ADA	P00813	363 aa		7.74	□□□□□ -1.17
CRNKL1-205	ENST00000496549	IFNA2	P01563	188 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms