RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 GSTA5Q7RTV2 222 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 SNX20Q7Z614 316 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 HAPLN4Q86UW8 402 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 SERPINA9Q86WD7 417 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 KRTAP1-3Q8IUG1 177 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 LRRC56Q8IYG6 542 aaPredicted RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 CIARTQ8N365 385 aaPredicted RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 DNAJC22Q8N4W6 341 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 CLDN19Q8N6F1 224 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 TC2NQ8N9U0 490 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 CLEC1AQ8NC01 280 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 OR8H1Q8NGG4 311 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 OR5K2Q8NHB8 316 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 ZNF398Q8TD17 642 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 MGARPQ8TDB4 240 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 LINC00476Q8WZB0 136 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 SNAPC3Q92966 411 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 ULK4Q96C45 1275 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 RBM41Q96IZ5 413 aaKnown RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 PDLIM2Q96JY6 352 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 C10orf90Q96M02 699 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 SPATA13Q96N96 652 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 TTC25Q96NG3 672 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 IP6K3Q96PC2 410 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 COPS8Q99627 209 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 CHP1Q99653 195 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 C17orf62Q9BQA9 187 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 CCM2Q9BSQ5 444 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 IFT27Q9BW83 186 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 FAM96AQ9H5X1 160 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 DENND2DQ9H6A0 471 aaPredicted RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 ASB8Q9H765 288 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 MVB12BQ9H7P6 319 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 WDR54Q9H977 334 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 CHST11Q9NPF2 352 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 PARPBPQ9NWS1 579 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 IFNKQ9P0W0 207 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 CRLS1Q9UJA2 301 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 PPIEQ9UNP9 301 aaKnown RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 TFR2Q9UP52 801 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 EXO1Q9UQ84 846 aaKnown RBP3.96□□□□□ -1.78
VPS52-222ENST00000495981 FAM96BQ9Y3D0 163 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 PRSS21Q9Y6M0 314 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 COLEC10Q9Y6Z7 277 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 SEC16AO15027 2179 aa3.96□□□□□ -1.78
VPS52-222ENST00000495981 IGLV3-12A0A075B6K2 115 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 TRBV5-7A0A0A0MS05 114 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 C5orf60A6NFR6 353 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 OR51F1A6NGY5 319 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 VSTM2BA6NLU5 285 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 H0YAE9 185 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 SPOPO43791 374 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CTSVO60911 334 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ANXA9O76027 345 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 TPOP07202 933 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 HBQ1P09105 142 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ERGP11308 486 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 COX6A1P12074 109 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ZNF182P17025 639 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 TMEM11P17152 192 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ATP5F1P24539 256 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 PSMB5P28074 263 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 PTGER1P34995 402 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 RAB28P51157 221 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 GEMP55040 296 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 DCDP81605 110 aaKnown RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 SPOCK1Q08629 439 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 KLF10Q13118 480 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 MFAP5Q13361 173 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ITIH4Q14624 930 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ZNF169Q14929 603 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 CEBPEQ15744 281 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 INAQ16352 499 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 GPR33Q49SQ1 333 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CST9LP1Q5W188 147 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ZNF534Q76KX8 674 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 BIVMQ86UB2 503 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 VRK3Q8IV63 474 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CDKL3Q8IVW4 592 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 VSTM4Q8IW00 320 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CFAP206Q8IYR0 622 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 SLC22A15Q8IZD6 547 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 DPP10Q8N608 796 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 METTL27Q8N6F8 245 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 LMNTD1Q8N9Z9 388 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 OR11G2Q8NGC1 345 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 OR13J1Q8NGT2 312 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 OR14L1PQ8NHC6 308 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 MOSPD2Q8NHP6 518 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 CCDC110Q8TBZ0 833 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 ACTL9Q8TC94 416 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 DENND1AQ8TEH3 1009 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 WIPF2Q8TF74 440 aaPredicted RBP3.95□□□□□ -1.78
VPS52-222ENST00000495981 IGFBPL1Q8WX77 278 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 PSMF1Q92530 271 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 TM9SF4Q92544 642 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 NR4A3Q92570 626 aa3.95□□□□□ -1.78
VPS52-222ENST00000495981 TFGQ92734 400 aaPredicted RBP3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms