RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 NHSL2Q5HYW2 709 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 LIPMQ5VYY2 423 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 ANKRD26P1Q6NSI1 321 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 POMZP3Q6PJE2 187 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 Q6ZSR9 355 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 TRIM46Q7Z4K8 759 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 CDH24Q86UP0 819 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 PLCZ1Q86YW0 608 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 LACC1Q8IV20 430 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 SAMD14Q8IZD0 417 aaPredicted RBP8.73□□□□□ -1.01
MSH5-218ENST00000494646 RELL2Q8NC24 303 aaPredicted RBP8.73□□□□□ -1.01
MSH5-218ENST00000494646 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.73□□□□□ -1.01
MSH5-218ENST00000494646 SLC35A4Q96G79 324 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 GATA5Q9BWX5 397 aaPredicted RBP8.73□□□□□ -1.01
MSH5-218ENST00000494646 TAS2R10Q9NYW0 307 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 TAS2R9Q9NYW1 312 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 KCNN3Q9UGI6 736 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 BAIAP2L1Q9UHR4 511 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 FBXL2Q9UKC9 423 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 RPH3AQ9Y2J0 694 aaPredicted RBP8.73□□□□□ -1.01
MSH5-218ENST00000494646 L3MBTL1Q9Y468 752 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 CCL27Q9Y4X3 112 aa8.73□□□□□ -1.01
MSH5-218ENST00000494646 B4DXG7 233 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 UPK1AO00322 258 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 SLC28A1O00337 649 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 DVL2O14641 736 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 AZIN1O14977 448 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 AKAP10O43572 662 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 SCO2O43819 266 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 ACTL6AO96019 429 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 LINC00032P0C843 101 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 CYP4B1P13584 511 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 KIR2DL3P43628 341 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 GSTM5P46439 218 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 PRKAG1P54619 331 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 GAS1P54826 345 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 NAA20P61599 178 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 PSG6Q00889 435 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 FOXF2Q12947 444 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 KIAA0040Q15053 153 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 SF3B4Q15427 424 aaKnown RBP eCLIP8.72□□□□□ -1.019e-6■■□□□ 14.4
MSH5-218ENST00000494646 NSUN5P2Q63ZY6 315 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 TMEM81Q6P7N7 255 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 ZNF551Q7Z340 670 aaPredicted RBP8.72□□□□□ -1.01
MSH5-218ENST00000494646 EIF1ADQ8N9N8 165 aaKnown RBP8.72□□□□□ -1.01
MSH5-218ENST00000494646 C9orf106Q8NAJ2 232 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 CLHC1Q8NHS4 586 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 ERP27Q96DN0 273 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 ELP4Q96EB1 424 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 AMDHD1Q96NU7 426 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 BTBD9Q96Q07 612 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 TUBA1CQ9BQE3 449 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 DSN1Q9H410 356 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 ANKZF1Q9H8Y5 726 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 MYNNQ9NPC7 610 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
MSH5-218ENST00000494646 FLRT3Q9NZU0 649 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 CRIM1Q9NZV1 1036 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 MED11Q9P086 117 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 SH3BP4Q9P0V3 963 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 ZNF629Q9UEG4 869 aaPredicted RBP8.72□□□□□ -1.01
MSH5-218ENST00000494646 CBLCQ9ULV8 474 aa8.72□□□□□ -1.01
MSH5-218ENST00000494646 C19orf53Q9UNZ5 99 aaPredicted RBP8.72□□□□□ -1.01
MSH5-218ENST00000494646 F8P00451 2351 aa8.71□□□□□ -1.01
MSH5-218ENST00000494646 PRRC2AP48634 2157 aaKnown RBP8.71□□□□□ -1.01
MSH5-218ENST00000494646 GXYLT2A0PJZ3 443 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 CD8B2A6NJW9 211 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 H0Y3Z8 333 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 H3BQF6 201 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 RGS14O43566 566 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GMFGO60234 142 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 ZIC3O60481 467 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 TRIM13O60858 407 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 RSL1D1O76021 490 aaKnown RBP8.71□□□□□ -1.02
MSH5-218ENST00000494646 CPN1P15169 458 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GRK2P25098 689 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 CTSSP25774 331 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 DPP4P27487 766 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 ALDH3A1P30838 453 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GABRA3P34903 492 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GPC1P35052 558 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GCKP35557 465 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 ASCL1P50553 236 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 DGKQP52824 942 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GFRA1P56159 465 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 STX5Q13190 355 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 RCAN2Q14206 197 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 PCLAFQ15004 111 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 GALNTL6Q49A17 601 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 RFTN2Q52LD8 501 aaPredicted RBP8.71□□□□□ -1.02
MSH5-218ENST00000494646 ENPP6Q6UWR7 440 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 IFNEQ86WN2 208 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 OR4K17Q8NGC6 315 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 OR5M1Q8NGP8 315 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 OR2T11Q8NH01 316 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 FAM76AQ8TAV0 307 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 LINC01560Q8TB33 94 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 ZPLD1Q8TCW7 415 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 DUSP19Q8WTR2 217 aa8.71□□□□□ -1.02
MSH5-218ENST00000494646 RNASE6Q93091 150 aaKnown RBP8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms