RNA–Protein interactions for RNA: ENST00000494566.5

CCDC88B-210, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 2,909 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-210ENST00000494566 TM9SF4Q92544 642 aa15.52■□□□□ 0.08
CCDC88B-210ENST00000494566 MS4A6EQ96DS6 147 aa15.52■□□□□ 0.08
CCDC88B-210ENST00000494566 ZNF607Q96SK3 696 aa15.52■□□□□ 0.08
CCDC88B-210ENST00000494566 TTTY10Q9BZA0 68 aa15.52■□□□□ 0.08
CCDC88B-210ENST00000494566 PCBD2Q9H0N5 130 aa15.52■□□□□ 0.08
CCDC88B-210ENST00000494566 ARHGEF17Q96PE2 2063 aaPredicted RBP15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 LOC102723532A0A0G2JNH3 316 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 CD8B2A6NJW9 211 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 NOTOA8MTQ0 251 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 ISM1B1AKI9 464 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 MAN2B1O00754 1011 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 HPGDSO60760 199 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 UGT2B17O75795 530 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 AIFM1O95831 613 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 CD8BP10966 210 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 OSMP13725 252 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 PPP2CBP62714 309 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 PPP2CAP67775 309 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 SLC9A5Q14940 896 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 CCDC58Q4VC31 144 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 MLIPQ5VWP3 458 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 SUN3Q8TAQ9 357 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 CDCA4Q9BXL8 241 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 SRRQ9GZT4 340 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 BTBD1Q9H0C5 482 aa15.52■□□□□ 0.07
CCDC88B-210ENST00000494566 MRPS14O60783 128 aaKnown RBP15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 MSL3P1P0C860 447 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 MYL9P24844 172 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 PKLRP30613 574 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 KIR2DL3P43628 341 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 AVPR1BP47901 424 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 ZNF791Q3KP31 576 aaPredicted RBP15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 OR4F15Q8NGB8 312 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 OR9A2Q8NGT5 310 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 ENKURQ8TC29 256 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 TAPBPLQ9BX59 468 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 SLC17A9Q9BYT1 436 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 ANKHQ9HCJ1 492 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 APOBEC3BQ9UH17 382 aaKnown RBP15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 BTN3A3O00478 584 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 HIST1H1TP22492 207 aaPredicted RBP15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 MMP11P24347 488 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 MC3RP41968 323 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 OR2L3Q8NG85 312 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 OR52I1Q8NGK6 324 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 COL26A1Q96A83 441 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 RPRD1BQ9NQG5 326 aaKnown RBP15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 PRDM7Q9NQW5 492 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 SNX7Q9UNH6 387 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 GPR55Q9Y2T6 319 aaPredicted RBP15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 DSPPQ9NZW4 1301 aa15.51■□□□□ 0.07
CCDC88B-210ENST00000494566 ZC3H12DA2A288 527 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 FAM183AA6NL82 134 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 CASKO14936 926 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 RNGTTO60942 597 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 CLEC3AO75596 197 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ADAP00813 363 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 HSD17B2P37059 387 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 TFF2Q03403 129 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 IL18Q14116 193 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ASB18Q6ZVZ8 466 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ZER1Q7Z7L7 766 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 RAB42Q8N4Z0 105 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 TBC1D19Q8N5T2 526 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 TMCO6Q96DC7 493 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 GDE1Q9NZC3 331 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 STUB1Q9UNE7 303 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ASB4Q9Y574 426 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 DNAJB6O75190 326 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 LALBAP00709 142 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 C5AR1P21730 350 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 NTSP30990 170 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 RPE65Q16518 533 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ABHD17CQ6PCB6 329 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 VRK2Q86Y07 508 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 OR4N5Q8IXE1 308 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 FNDC11Q9BVV2 318 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 MAN2C1Q9NTJ4 1040 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 TBC1D29Q9UFV1 150 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 CPSF4LA6NMK7 179 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 K7EQS6 105 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 PDE9AO76083 593 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ATP5A1P25705 553 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 LIMK1P53667 647 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 MTFR2Q6P444 385 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 OR4K5Q8NGD3 323 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 WACQ9BTA9 647 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 OR2B2Q9GZK3 357 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 MOV10Q9HCE1 1003 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ACSS1Q9NUB1 689 aaPredicted RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 COQ3Q9NZJ6 369 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 ITGB1BP2Q9UKP3 347 aa15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 LSM2Q9Y333 95 aaKnown RBP15.5■□□□□ 0.07
CCDC88B-210ENST00000494566 TP53P04637 393 aaPredicted RBP15.49■□□□□ 0.07
CCDC88B-210ENST00000494566 PPP2R1BP30154 601 aa15.49■□□□□ 0.07
CCDC88B-210ENST00000494566 ATP6V1E1P36543 226 aa15.49■□□□□ 0.07
CCDC88B-210ENST00000494566 BTN3A2P78410 334 aa15.49■□□□□ 0.07
CCDC88B-210ENST00000494566 SCN1BQ07699 218 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms