RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 VAPAQ9P0L0 249 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 OR1A2Q9Y585 309 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 UBE2NP61088 152 aaKnown RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 SNTB2Q13425 540 aaKnown RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ASB15Q8WXK1 588 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ITPKCQ96DU7 683 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TMEM246Q9BRR3 403 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 TP63Q9H3D4 680 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 HEBP1Q9NRV9 189 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF701Q9NV72 531 aaPredicted RBP18.16■□□□□ 0.5
COL27A1-207ENST00000494090 ANKMY1Q9P2S6 941 aa18.16■□□□□ 0.5
COL27A1-207ENST00000494090 A0A1W2PPK0 400 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 BCAS1O75363 584 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 ATE1O95260 518 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 CFL1P23528 166 aaKnown RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 LRFN4Q6PJG9 635 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 TMPRSS12Q86WS5 348 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 ZNF611Q8N823 705 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 GJD2Q9UKL4 321 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 AP1M2Q9Y6Q5 423 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 A6NLC8 198 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 CD63P08962 238 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 SHC2P98077 582 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 NDUFAF5Q5TEU4 345 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 LIX1LQ8IVB5 337 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 THAP3Q8WTV1 239 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 TRIM43Q96BQ3 446 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 OR4K3Q96R72 315 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 MEPEQ9NQ76 525 aaPredicted RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 POU2F3Q9UKI9 436 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 M0R036 132 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 SDC1P18827 310 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 ZXDBP98169 803 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 GALK2Q01415 458 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 NTRK2Q16620 822 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 FAM69BQ5VUD6 431 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 PNPLA1Q8N8W4 532 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 GDPD1Q8N9F7 314 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 ISG20Q96AZ6 181 aaKnown RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 ENPP5Q9UJA9 477 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 DOT1LQ8TEK3 1739 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 PRAMEF26H0Y7S4 382 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 TMEM189-UBE2V1I3L0A0 370 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 DNASE1P24855 282 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 HOXC13P31276 330 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 SLC6A8P48029 635 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 MELKQ14680 651 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 NNATQ16517 81 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 USP53Q70EK8 1073 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 DCP2Q8IU60 420 aaKnown RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 PHC2Q8IXK0 858 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 PIANPQ8IYJ0 282 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 PEX11GQ96HA9 241 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 MAELQ96JY0 434 aaKnown RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 KCNN3Q9UGI6 736 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 INTS6Q9UL03 887 aaKnown RBP18.15■□□□□ 0.5
COL27A1-207ENST00000494090 KCNS2Q9ULS6 477 aa18.15■□□□□ 0.5
COL27A1-207ENST00000494090 IFNA2P01563 188 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 UCHL1P09936 223 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 ECH1Q13011 328 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 ZFP41Q8N8Y5 198 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 IL17RCQ8NAC3 791 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 POGLUT1Q8NBL1 392 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 SLC41A3Q96GZ6 507 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 KLHL42Q9P2K6 505 aa18.14■□□□□ 0.5
COL27A1-207ENST00000494090 FMO6PO60774 539 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 TNFRSF1BP20333 461 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 MPP7Q5T2T1 576 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 CARD17Q5XLA6 110 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 CDRT4Q8N9R6 151 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 OR13C3Q8NGS6 347 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 OR5J2Q8NH18 312 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 ITFG2Q969R8 447 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 METTL2AQ96IZ6 378 aaKnown RBP18.14■□□□□ 0.49
COL27A1-207ENST00000494090 MS4A4EQ96PG1 132 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 ZNF300Q96RE9 604 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-207ENST00000494090 ZBTB20Q9HC78 741 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-207ENST00000494090 C2orf42Q9NWW7 574 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 TMX2-CTNND1H3BSU7 103 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 ITGB7P26010 798 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 PRDX3P30048 256 aaKnown RBP18.14■□□□□ 0.49
COL27A1-207ENST00000494090 RNF144AP50876 292 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-207ENST00000494090 SHFQ7M4L6 423 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 LCKP06239 509 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 AMY2BP19961 511 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 NKX3-2P78367 333 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 FIGNL1Q6PIW4 674 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 LCTLQ6UWM7 567 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 CPXM2Q8N436 756 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 PITX2Q99697 317 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 PARPBPQ9NWS1 579 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 PAQR5Q9NXK6 330 aaPredicted RBP18.14■□□□□ 0.49
COL27A1-207ENST00000494090 CD207Q9UJ71 328 aa18.14■□□□□ 0.49
COL27A1-207ENST00000494090 NRMQ8IXM6 262 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 MFSD8Q8NHS3 518 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 EVA1AQ9H8M9 152 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 RIMS3Q9UJD0 308 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 IFNA5P01569 189 aa18.13■□□□□ 0.49
COL27A1-207ENST00000494090 SIM1P81133 766 aaPredicted RBP18.13■□□□□ 0.49
COL27A1-207ENST00000494090 APOFQ13790 326 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms