RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 RFPL1O75677 317 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CPNE6O95741 557 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ANGPTL1O95841 491 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 IL1AP01583 271 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PRR23D2P0DMB1 279 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 NME1P15531 152 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 SDHAP31040 664 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FMO4P31512 558 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PRPS1P60891 318 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PSME3P61289 254 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CRADDP78560 199 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 REEP5Q00765 189 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 SQSTM1Q13501 440 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CCNIQ14094 377 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 DNLZQ5SXM8 178 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 IRAK1BP1Q5VVH5 260 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 BHLHA15Q7RTS1 189 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 P4HA3Q7Z4N8 544 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 THNSL2Q86YJ6 484 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 TGIF2LXQ8IUE1 241 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PHYKPLQ8IUZ5 450 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MCATQ8IVS2 390 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 DMBX1Q8NFW5 382 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MAPKAP1Q9BPZ7 522 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ZFYVE21Q9BQ24 234 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 TEX101Q9BY14 249 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ANKRD60Q9BZ19 345 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MIXL1Q9H2W2 232 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 TMEM184CQ9NVA4 438 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 TBC1D29Q9UFV1 150 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 LRP4O75096 1905 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CABIN1Q9Y6J0 2220 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MYOCOSA0A1B0GUC4 107 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 STX16O14662 325 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 SMAD9O15198 467 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FFAR2O15552 330 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 KCNAB3O43448 404 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 DOK2O60496 412 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CTNSO60931 367 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MTX2O75431 263 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CYC1P08574 325 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 BRAFP15056 766 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MUC1P15941 1255 aaPredicted RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PAICSP22234 425 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 DNASE1P24855 282 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PTGIRP43119 386 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FHITP49789 147 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CEBPGP53567 150 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 MAZP56270 477 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 NHLH2Q02577 135 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 TSPAN31Q12999 210 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 SHBQ15464 509 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 SMAD1Q15797 465 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PRRT3Q5FWE3 981 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 C6orf52Q5T4I8 152 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ZDHHC20Q5W0Z9 365 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CLEC6AQ6EIG7 209 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FAM111BQ6SJ93 734 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 ZZZ3Q8IYH5 903 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FAM185AQ8N0U4 392 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 LMX1AQ8TE12 382 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PAQR8Q8TEZ7 354 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 RPL3LQ92901 407 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 SLCO2A1Q92959 643 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 NARS2Q96I59 477 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 APOL4Q9BPW4 351 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 THTPAQ9BU02 230 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 CARS2Q9HA77 564 aaKnown RBP10.92□□□□□ -0.66
BRCA1-222ENST00000493919 FBXO5Q9UKT4 447 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 KCNIP3Q9Y2W7 256 aa10.92□□□□□ -0.66
BRCA1-222ENST00000493919 PRSS38A1L453 326 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 FCHO1O14526 889 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 SLC25A14O95258 325 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 CSF2P04141 144 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 CTSEP14091 401 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 MGAT1P26572 445 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 ADH6P28332 368 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 TEAD1P28347 426 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 MAP3K8P41279 467 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 CDC34P49427 236 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 BLKP51451 505 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 C1orf61Q13536 156 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 SNTB1Q13884 538 aaKnown RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 RPS6KA2Q15349 733 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 HIST2H2ACQ16777 129 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 DGUOKQ16854 277 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 HFEQ30201 348 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 SLC35D3Q5M8T2 416 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF648Q5T619 568 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 IZUMO3Q5VZ72 239 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 ETFRF1Q6IPR1 90 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 SYDE1Q6ZW31 735 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF534Q76KX8 674 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 NAXDQ8IW45 347 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 POGLUT1Q8NBL1 392 aa10.91□□□□□ -0.66
BRCA1-222ENST00000493919 PAPD5Q8NDF8 572 aaKnown RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 ZNF548Q8NEK5 533 aaPredicted RBP10.91□□□□□ -0.66
BRCA1-222ENST00000493919 OR9A2Q8NGT5 310 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms