RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 C18orf25Q96B23 403 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 ZNF799Q96GE5 643 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 KRTAP4-3Q9BYR4 195 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 TNMDQ9H2S6 317 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 EHD1Q9H4M9 534 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 COPS7AQ9UBW8 275 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 FAM153AQ9UHL3 310 aa2.84□□□□□ -1.95
ITGB1-216ENST00000493758 MTF2Q9Y483 593 aaPredicted RBP2.84□□□□□ -1.95
ITGB1-216ENST00000493758 CFAP65Q6ZU64 1925 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 FAM231BA6NCW3 169 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 CCDC69A6NI79 296 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 STAM2O75886 525 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 NDUFA7O95182 113 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 OLFM2O95897 454 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 HNRNPFP52597 415 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 PKN2Q16513 984 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 HFEQ30201 348 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 CCDC14Q49A88 953 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 FAM159AQ6UWV7 190 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 HACD2Q6Y1H2 254 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 TOM1L2Q6ZVM7 507 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 PARGQ86W56 976 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 GPBP1Q86WP2 473 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 C16orf74Q96GX8 76 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 WRAP53Q9BUR4 548 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 ISG20L2Q9H9L3 353 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 MEPEQ9NQ76 525 aaPredicted RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 PLSCR3Q9NRY6 295 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 DCAF13Q9NV06 445 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 ELOVL2Q9NXB9 296 aa2.83□□□□□ -1.96
ITGB1-216ENST00000493758 EXOSC1Q9Y3B2 195 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 DHX29Q7Z478 1369 aaKnown RBP2.83□□□□□ -1.96
ITGB1-216ENST00000493758 TMEM89A2RUT3 159 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 PINLYPA6NC86 204 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 PANO1I0J062 215 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 SDC3O75056 442 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 SLC35G4P0C7Q5 338 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 HLCSP50747 726 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 RPS6P62753 249 aaKnown RBP2.82□□□□□ -1.96
ITGB1-216ENST00000493758 GNB2P62879 340 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 PARP6Q2NL67 630 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 C1QTNF12Q5T7M4 302 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 KRTAP5-5Q701N2 237 aaPredicted RBP2.82□□□□□ -1.96
ITGB1-216ENST00000493758 LRRC17Q8N6Y2 441 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 LEMD2Q8NC56 503 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 TMEM185AQ8NFB2 350 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 ELSPBP1Q96BH3 223 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 SLC25A36Q96CQ1 311 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 CARD6Q9BX69 1037 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 NMUR2Q9GZQ4 415 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 ABCG4Q9H172 646 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 FAM114A2Q9NRY5 505 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 RPS6KB2Q9UBS0 482 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 FZR1Q9UM11 496 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 TDRKHQ9Y2W6 561 aaKnown RBP2.82□□□□□ -1.96
ITGB1-216ENST00000493758 GRIN2DO15399 1336 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 ARHGAP23Q9P227 1491 aa2.82□□□□□ -1.96
ITGB1-216ENST00000493758 A0A0U1RRA0 63 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 WWP2O00308 870 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 VEGFDO43915 354 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ZNF861PO60384 105 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 STSP08842 583 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 RFC2P35250 354 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 SLC26A2P50443 739 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 SRP54P61011 504 aaKnown RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 HERVK_113P63132 956 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ERVK-8P63133 956 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 GALK2Q01415 458 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 CKAP4Q07065 602 aaKnown RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ACTN3Q08043 901 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 PSG7Q13046 419 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 RAB35Q15286 201 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 CYP51A1Q16850 503 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 CMPK2Q5EBM0 449 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 NET1Q7Z628 596 aaPredicted RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ADGRD2Q7Z7M1 963 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ADAMTS16Q8TE57 1224 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 DQX1Q8TE96 717 aaKnown RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 CABS1Q96KC9 395 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ZNF560Q96MR9 790 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ATP6V0BQ99437 205 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 ERVK-6Q9BXR3 956 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 DDX47Q9H0S4 455 aaKnown RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 SIRPDQ9H106 197 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 Q9H3A6 140 aa2.81□□□□□ -1.96
ITGB1-216ENST00000493758 NOL7Q9UMY1 257 aaKnown RBP2.81□□□□□ -1.96
ITGB1-216ENST00000493758 MEGF6O75095 1541 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 A0A0U1RQG5 324 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 SLC9B1P1A6NJY1 282 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 E9PMD0 336 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 K7ENP7 123 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 SGK494L7N484 410 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 OR7A17O14581 309 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 CABYRO75952 493 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 ACTL6AO96019 429 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 PGK1P00558 417 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 SEMG1P04279 462 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
ITGB1-216ENST00000493758 NR2C1P13056 603 aa2.8□□□□□ -1.96
ITGB1-216ENST00000493758 CPN1P15169 458 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms