RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 PTCHD4Q6ZW05 846 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM200AQ86VY9 491 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SPNS2Q8IVW8 549 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SYT14Q8NB59 555 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FAM46DQ8NEK8 389 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR52P1PQ8NH57 321 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CNTNAP3BQ96NU0 1288 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 MAPKAP1Q9BPZ7 522 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PIGMQ9H3S5 423 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SMOC1Q9H4F8 434 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ALG9Q9H6U8 611 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CDHR5Q9HBB8 845 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CLN6Q9NWW5 311 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 COX16Q9P0S2 106 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ING1Q9UK53 422 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FZD4Q9ULV1 537 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PCDHA10Q9Y5I2 948 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ATG2AQ2TAZ0 1938 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 A0A0A6YYC8 382 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 BCLAF3A2AJT9 711 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 TMEM210A6NLX4 147 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 MCRIP1C9JLW8 97 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 I3L1I5 382 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CASC3O15234 703 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR2T1O43869 369 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CACNG3O60359 315 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR1I1O60431 355 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 NCR1O76036 304 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SCELO95171 688 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 HPP00738 406 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 NPSP0C0P6 89 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 EBLN1P0CF75 366 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 TBXA2RP21731 343 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 RPL34P49207 117 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 DGKEP52429 567 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ADPRHP54922 357 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SEC61A1P61619 476 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 KIAA0141Q14154 515 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ARHGEF7Q14155 803 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PTGR1Q14914 329 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 DUOXA1Q1HG43 343 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ARHGAP15Q53QZ3 475 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CARD16Q5EG05 197 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 C18orf63Q68DL7 685 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ACSM5Q6NUN0 579 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ABHD13Q7L211 337 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 MISPQ8IVT2 679 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 KLHDC8BQ8IXV7 354 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 GPR26Q8NDV2 337 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 DENND6BQ8NEG7 585 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PIH1D2Q8WWB5 315 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ROBO4Q8WZ75 1007 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PIWIL1Q96J94 861 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF599Q96NL3 588 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ZIC5Q96T25 663 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PTPN18Q99952 460 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF471Q9BX82 626 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 MFFQ9GZY8 342 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 RHOJQ9H4E5 214 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 JPH1Q9HDC5 661 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 VNN3Q9NY84 501 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ZNF223Q9UK11 482 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 RNF24Q9Y225 148 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 C7orf66A4D0T2 115 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 DUXAA6NLW8 204 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 TARM1B6A8C7 271 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 BPNT1O95861 308 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 S1PR4O95977 384 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 IL1AP01583 271 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PCCBP05166 539 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 IQCF3P0C7M6 154 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR8U8P0C7N1 319 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SULT1A3P0DMM9 295 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SULT1A4P0DMN0 295 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SDHAP31040 664 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 HTR5AP47898 357 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 HCCSP53701 268 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PRKCZQ05513 592 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 TRA2AQ13595 282 aaKnown RBP eCLIP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 CELF3Q5SZQ8 465 aaKnown RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 IDNKQ5T6J7 187 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SFRP4Q6FHJ7 346 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 LYPD4Q6UWN0 246 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 GDPGP1Q6ZNW5 385 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 DPPA4Q7L190 304 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PXKQ7Z7A4 578 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 LRRTM1Q86UE6 522 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 PHACTR4Q8IZ21 702 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR4A15Q8NGL6 344 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 OR6X1Q8NH79 312 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 ZCCHC10Q8TBK6 192 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FBLIM1Q8WUP2 373 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 APH1BQ8WW43 257 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 TEX37Q96LM6 180 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 IL4I1Q96RQ9 567 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 XYLT2Q9H1B5 865 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 FZD3Q9NPG1 666 aa6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SDR39U1Q9NRG7 319 aaPredicted RBP6.48□□□□□ -1.37
VPS13B-205ENST00000493587 SUSD5O60279 629 aa6.47□□□□□ -1.37
VPS13B-205ENST00000493587 EEDO75530 441 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms