RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 DGKQP52824 942 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 KCNK10P57789 538 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 STX1BP61266 288 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 MRPS22P82650 360 aaKnown RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 RBPJQ06330 500 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 GAB1Q13480 694 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 TP53BP2Q13625 1128 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 LASP1Q14847 261 aaKnown RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 DECR1Q16698 335 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 EIF2S3LQ2VIR3 472 aaKnown RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 KRTCAP3Q53RY4 240 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 DESI1Q6ICB0 168 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 MFSD12Q6NUT3 480 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 ZCCHC12Q6PEW1 402 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 BHLHB9Q6PI77 547 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 MIER2Q8N344 545 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 GLB1L3Q8NCI6 653 aaPredicted RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 OR5AK3PQ8NH89 298 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 PRR7Q8TB68 274 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 HGDQ93099 445 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 EFHD2Q96C19 240 aaPredicted RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 TMCO6Q96DC7 493 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 THOC1Q96FV9 657 aaKnown RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 CHMP6Q96FZ7 201 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 SLC35A4Q96G79 324 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 ZNF597Q96LX8 424 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 JSRP1Q96MG2 331 aaPredicted RBP11.73□□□□□ -0.53
CLIP2-209ENST00000493166 RILPQ96NA2 401 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 NODALQ96S42 347 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 YIPF4Q9BSR8 244 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 CCDC28BQ9BUN5 200 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 PROK2Q9HC23 129 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 NPHS2Q9NP85 383 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 KLRF1Q9NZS2 232 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 ZIM2Q9NZV7 527 aa11.73□□□□□ -0.53
CLIP2-209ENST00000493166 HIVEP3Q5T1R4 2406 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 RNF103-CHMP3A0A140T963 221 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PRAMEF25A6NGN4 478 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 ASNA1O43681 348 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 CDC40O60508 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 GLSO94925 669 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 NKX2-2O95096 273 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 SNX4O95219 450 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 KCNH1O95259 989 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 CPSF4O95639 269 aaKnown RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 HMGN2P05204 90 aaKnown RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PGRP06401 933 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 KRT16P08779 473 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 ALOX5P09917 674 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 ACP2P11117 423 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 RFX3P48380 749 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PNLIPRP2P54317 469 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PSMD4P55036 377 aaKnown RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PHC1P78364 1004 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 GUCY1A3Q02108 690 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 FOXO1Q12778 655 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 TMEM81Q6P7N7 255 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 BNC2Q6ZN30 1099 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PACS2Q86VP3 889 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 GHDCQ8N2G8 530 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 SLC16A11Q8NCK7 471 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PIK3R3Q92569 461 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 HOXB13Q92826 284 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 OTUB1Q96FW1 271 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 RMND5BQ96G75 393 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 C16orf58Q96GQ5 468 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 OR52E6Q96RD3 313 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 OSBPL11Q9BXB4 747 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 ANGPTL4Q9BY76 406 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 ZFP64Q9NPA5 681 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 SDR39U1Q9NRG7 319 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 B4GALT7Q9UBV7 327 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 DCTN4Q9UJW0 460 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 FAF1Q9UNN5 650 aaPredicted RBP11.72□□□□□ -0.53
CLIP2-209ENST00000493166 PCNX3Q9H6A9 2034 aa11.72□□□□□ -0.53
CLIP2-209ENST00000493166 GXYLT2A0PJZ3 443 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 SCN2BO60939 215 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 TRIM3O75382 744 aaPredicted RBP11.71□□□□□ -0.53
CLIP2-209ENST00000493166 WISP2O76076 250 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 IL33O95760 270 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 IL6P05231 212 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 VIMP08670 466 aaKnown RBP11.71□□□□□ -0.53
CLIP2-209ENST00000493166 CYP4B1P13584 511 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 MAP3K8P41279 467 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 MAGEA5P43359 124 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 LRRC74AQ0VAA2 488 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 SNTA1Q13424 505 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 DUSP5Q16690 384 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 HYAL4Q2M3T9 481 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 CMPK2Q5EBM0 449 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 SLC30A6Q6NXT4 461 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 CDC73Q6P1J9 531 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 FAM109AQ8N4B1 249 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 TMEM251Q8N6I4 163 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 COX18Q8N8Q8 333 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 OR52N2Q8NGI0 321 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 OR9I1Q8NGQ6 314 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 RFWD2Q8NHY2 731 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 TMEM41AQ96HV5 264 aa11.71□□□□□ -0.53
CLIP2-209ENST00000493166 SLC35G5Q96KT7 338 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms