RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 HSD17B7P56937 341 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 CFHR1Q03591 330 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 DUSP8Q13202 625 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 EXOSC7Q15024 291 aaKnown RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 LARS2Q15031 903 aaKnown RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 AMZ1Q400G9 498 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 MED25Q71SY5 747 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 PRSS42Q7Z5A4 293 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 CCDC71Q8IV32 467 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 GALNT12Q8IXK2 581 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 D2HGDHQ8N465 521 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 Q8N9G6 341 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 BPIFB6Q8NFQ5 453 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 OR51Q1Q8NH59 317 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 RIT1Q92963 219 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 GTPBP3Q969Y2 492 aaKnown RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 MVB12AQ96EY5 273 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 SLC41A2Q96JW4 573 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 ZNF578Q96N58 590 aaPredicted RBP13.09□□□□□ -0.31
PTPN7-216ENST00000492977 DGCR6LQ9BY27 220 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 ALOXE3Q9BYJ1 711 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 POLR1BQ9H9Y6 1135 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 SCN3BQ9NY72 215 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 MKLN1Q9UL63 735 aa13.09□□□□□ -0.31
PTPN7-216ENST00000492977 A0A1B0GTQ1 180 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 CCDC160A6NGH7 325 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 AGAP5A6NIR3 686 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 H3BMH7 237 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 H3BSA7 217 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 ARHGAP33O14559 1287 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF749O43361 778 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 OR10H3O60404 316 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 MRPS14O60783 128 aaKnown RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 OR2B3O76000 313 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 NKX2-2O95096 273 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 CPNE6O95741 557 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 GUSBP08236 651 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 RPS4Y1P22090 263 aaKnown RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 EPHA8P29322 1005 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 IFNA8P32881 189 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 GALNSP34059 522 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 MAT1AQ00266 395 aaKnown RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 TEKQ02763 1124 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 KCNAB1Q14722 419 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 SEC23BQ15437 767 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 NPTX1Q15818 432 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 PLK5Q496M5 336 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 EIPR1Q53HC9 387 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 DCST2Q5T1A1 773 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 KLHL17Q6TDP4 642 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 KANSL1Q7Z3B3 1105 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 B3GNT8Q7Z7M8 397 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 HMGN2P46Q86SG4 172 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 ENTHD1Q8IYW4 607 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 ALDH16A1Q8IZ83 802 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 DEPDC4Q8N2C3 294 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF619Q8N2I2 560 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 COX18Q8N8Q8 333 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 OR52R1Q8NGF1 315 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 SLC7A13Q8TCU3 470 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 GPR151Q8TDV0 419 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 DOK4Q8TEW6 326 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 CNDP2Q96KP4 475 aaKnown RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 DGAT2Q96PD7 388 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 PELOQ9BRX2 385 aaKnown RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 RBCK1Q9BYM8 510 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 UCK2Q9BZX2 261 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 CUTCQ9NTM9 273 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 ZNF443Q9Y2A4 671 aaPredicted RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 COMMD3-BMI1R4GMX3 469 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 TNRC6BQ9UPQ9 1833 aaKnown RBP13.08□□□□□ -0.32
PTPN7-216ENST00000492977 SPTBP11277 2137 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 CACNA1EQ15878 2313 aa13.08□□□□□ -0.32
PTPN7-216ENST00000492977 TMEM150CB9EJG8 249 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 DBIP07108 87 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 OSMP13725 252 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 POU2F1P14859 743 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 GSTT1P30711 240 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CSF2RBP32927 897 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 GABRA3P34903 492 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 STT3AP46977 705 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SEPHS1P49903 392 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CRISP1P54107 249 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 UGT2B15P54855 530 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 POU6F2P78424 691 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 COX10Q12887 443 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PMS2P3Q13401 168 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SQSTM1Q13501 440 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SERTAD2Q14140 314 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ZNHIT3Q15649 155 aaPredicted RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 DMRTA1Q5VZB9 504 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PGBD2Q6P3X8 592 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 PODNL1Q6PEZ8 512 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 DGAT2L6Q6ZPD8 337 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 SPARTQ8N0X7 666 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 CLIP4Q8N3C7 705 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 EDAQ92838 391 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 NODALQ96S42 347 aa13.07□□□□□ -0.32
PTPN7-216ENST00000492977 LMF2Q9BU23 707 aaKnown RBP13.07□□□□□ -0.32
PTPN7-216ENST00000492977 ANKRD19PQ9H560 264 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms