RNA–Protein interactions for RNA: ENST00000490839.1

AGAP3-222, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, human

TSL 4

Gene AGAP3, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AGAP3-222	ENST00000490839	GAS1	P54826	345 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	NR1H2	P55055	460 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	ATP5J2	P56134	94 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	CLDN15	P56746	228 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	MRPS22	P82650	360 aa	Known RBP	13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	IFT88	Q13099	833 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	CAPRIN1	Q14444	709 aa	Known RBP	13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	GUSBP1	Q15486	140 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	RAET1L	Q5VY80	246 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	HEPHL1	Q6MZM0	1159 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	KLC3	Q6P597	504 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	C22orf34	Q6ZV56	151 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	LARP4	Q71RC2	724 aa	Known RBP eCLIP	13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF610	Q8N9Z0	462 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	OR52B6	Q8NGF0	335 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF675	Q8TD23	568 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	CNRIP1	Q96F85	164 aa	Predicted RBP	13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	NTMT1	Q9BV86	223 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	FAIM2	Q9BWQ8	316 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	PINK1	Q9BXM7	581 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	KLHL4	Q9C0H6	718 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	CPSF2	Q9P2I0	782 aa	Known RBP	13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF780B	Q9Y6R6	833 aa		13.74	□□□□□ -0.21
AGAP3-222	ENST00000490839	RNF212B	A8MTL3	300 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	KLF4	O43474	513 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	SOX30	O94993	753 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	KLHL2	O95198	593 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	THBD	P07204	575 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	CT45A8	P0DMV1	189 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	CT45A9	P0DMV2	189 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	FCGR2A	P12318	317 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	NID1	P14543	1247 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	PNLIPRP2	P54317	469 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	CORO7	P57737	925 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	OCRL	Q01968	901 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	TRAF3	Q13114	568 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	TNK1	Q13470	666 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	GANAB	Q14697	944 aa	Known RBP	13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	ERCC6L	Q2NKX8	1250 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	GGTA1P	Q4G0N0	100 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	CT45A2	Q5DJT8	189 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF628	Q5EBL2	1059 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	ANKRD34A	Q69YU3	496 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	SH2D5	Q6ZV89	423 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	MILR1	Q7Z6M3	343 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF611	Q8N823	705 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	FADS6	Q8N9I5	356 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	FNDC9	Q8TBE3	224 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	VSTM2L	Q96N03	204 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	ZNF681	Q96N22	645 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	DPH5	Q9H2P9	285 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	ELOVL6	Q9H5J4	265 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839	PPP4R1L	Q9P1A2	415 aa		13.73	□□□□□ -0.21
AGAP3-222	ENST00000490839		H0YC42	278 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	HS3ST1	O14792	307 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	SEC14L5	O43304	696 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	ALDOA	P04075	364 aa	Known RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	HK1	P19367	917 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	EVI2B	P34910	448 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	PAFAH1B1	P43034	410 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	ALDH9A1	P49189	494 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	SUCLG1	P53597	346 aa	Known RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	TPD52	P55327	224 aa	Predicted RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	TRA2B	P62995	288 aa	Known RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	GALNT1	Q10472	559 aa	Predicted RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	PON3	Q15166	354 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	NPSR1	Q6W5P4	371 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	FAM214B	Q7L5A3	538 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	PTGR2	Q8N8N7	351 aa	Predicted RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	OR2M3	Q8NG83	312 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	TM4SF18	Q96CE8	201 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	GPR78	Q96P69	363 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	ERP44	Q9BS26	406 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	STMN4	Q9H169	189 aa	Predicted RBP	13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	DSN1	Q9H410	356 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	PCTP	Q9UKL6	214 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	UTS2R	Q9UKP6	389 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	SLC12A4	Q9UP95	1085 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	SAR1B	Q9Y6B6	198 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	PRR14L	Q5THK1	2151 aa		13.72	□□□□□ -0.21
AGAP3-222	ENST00000490839	FAM187A	A6NFU0	413 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	C17orf51	A8MQB3	221 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	SCO2	O43819	266 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	RPS3A	P61247	264 aa	Known RBP	13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	VEZF1	Q14119	521 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	ETFDH	Q16134	617 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	EXOC3L2	Q2M3D2	409 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	SGO1	Q5FBB7	561 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	TECRL	Q5HYJ1	363 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	MROH9	Q5TGP6	573 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	HMBOX1	Q6NT76	420 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	FAM180B	Q6P0A1	224 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	PODNL1	Q6PEZ8	512 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	METTL25	Q8N6Q8	603 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	FBF1	Q8TES7	1133 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	GFM2	Q969S9	779 aa	Known RBP	13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	EFHD2	Q96C19	240 aa	Predicted RBP	13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	TMEM204	Q9BSN7	226 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	BRF2	Q9HAW0	419 aa		13.71	□□□□□ -0.21
AGAP3-222	ENST00000490839	FOLH1B	Q9HBA9	442 aa		13.71	□□□□□ -0.21

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