RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 HDDC3Q8N4P3 179 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 DEFB123Q8N688 67 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 SUMF1Q8NBK3 374 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 RHOXF1Q8NHV9 184 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 FLVCR1-AS1Q8TAF5 88 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF671Q8TAW3 534 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 AGAP11Q8TF27 550 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 FCGR1BQ92637 280 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 LHX4Q969G2 390 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 MCCC1Q96RQ3 725 aaPredicted RBP2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 TSPAN18Q96SJ8 248 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 FAM173AQ9BQD7 235 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 TMEM231Q9H6L2 316 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 ALG9Q9H6U8 611 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 AMBNQ9NP70 447 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 NINJ2Q9NZG7 142 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF581Q9P0T4 197 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 DHRS4-AS1Q9P1J3 65 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 IGSF10Q6WRI0 2623 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 RELNP78509 3460 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 PIEZO2Q9H5I5 2752 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 YTHDC2Q9H6S0 1430 aaKnown RBP2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 TMEM131LA2VDJ0 1609 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 HTTP42858 3142 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 BRWD3Q6RI45 1802 aa2.75□□□□□ -1.97
AC055855.1-201ENST00000489563 FN1P02751 2386 aaKnown RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 FLNCQ14315 2725 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 SHPRHQ149N8 1683 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 FANCAO15360 1455 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 RAPGEF2Q9Y4G8 1499 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 TRAV9-2A0A087WT02 112 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF840PA6NDX5 716 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 H3BMH7 237 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 E2F3O00716 465 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 RASGRF2O14827 1237 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 TYROBPO43914 113 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 SRPX2O60687 465 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 STK17BO94768 372 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 KBTBD11O94819 623 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 TGFAP01135 160 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 PIGRP01833 764 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 IGHG3P01860 377 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ZCCHC18P0CG32 403 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 GHRP10912 638 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 CYP11B1P15538 503 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 BCL3P20749 454 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 IL10P22301 178 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 MAPK3P27361 379 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 RABIFP47224 123 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 IST1P53990 364 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 HERVK_113P63132 956 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ERVK-8P63133 956 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 MAP2K1Q02750 393 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 SRYQ05066 204 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 SNX1Q13596 522 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 KARSQ15046 597 aaKnown RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 PARP6Q2NL67 630 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 SLC22A6Q4U2R8 563 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 LINC00242Q5T6M2 205 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF774Q6NX45 483 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 TSEN54Q7Z6J9 526 aaKnown RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 MRPL43Q8N983 215 aaKnown RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF397Q8NF99 534 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 OR4F17Q8NGA8 305 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 WDR36Q8NI36 951 aaKnown RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 CRYGNQ8WXF5 182 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 CCDC51Q96ER9 411 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ZBED6CLQ96FA7 236 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 C1orf147Q96MC9 270 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 FAM111AQ96PZ2 611 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 OR4F4Q96R69 305 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 APOL2Q9BQE5 337 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ERVK-6Q9BXR3 956 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 TRIM9Q9C026 710 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 KRT23Q9C075 422 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 RAB17Q9H0T7 212 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ZBP1Q9H171 429 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 C1orf21Q9H246 121 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 TSPY26PQ9H489 355 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 CENPMQ9NSP4 180 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 CLEC5AQ9NY25 188 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 RAI14Q9P0K7 980 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 IL20RAQ9UHF4 553 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 FZR1Q9UM11 496 aa2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 COL16A1Q07092 1604 aaPredicted RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ANKHD1Q8IWZ3 2542 aaKnown RBP2.74□□□□□ -1.97
AC055855.1-201ENST00000489563 ARHGEF28Q8N1W1 1705 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 SIGLEC1Q9BZZ2 1709 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ARAP3Q8WWN8 1544 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 UBE4BO95155 1302 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 CUL7Q14999 1698 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 IGHV3OR16-12A0A075B7B8 117 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 LRIT2A6NDA9 550 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 MFSD2BA6NFX1 497 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 C11orf98E9PRG8 122 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ADAM12O43184 909 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 RHBDL1O75783 438 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 STAM2O75886 525 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PRAMEF12O95522 483 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms