RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 TSGA10Q9BZW7 698 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 DDX47Q9H0S4 455 aaKnown RBP10.18□□□□□ -0.78
HDAC6-233ENST00000489352 PTGES2Q9H7Z7 377 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 WDR41Q9HAD4 459 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 PPP4R1LQ9P1A2 415 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 SPEF1Q9Y4P9 236 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 PPIAL4AQ9Y536 164 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 PCDHB14Q9Y5E9 798 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 AP4B1Q9Y6B7 739 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 TENM3Q9P273 2699 aa10.18□□□□□ -0.78
HDAC6-233ENST00000489352 OR2M5A3KFT3 312 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 M0QZ24 198 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 SCAMP2O15127 329 aaKnown RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 REM1O75628 298 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 WDR47O94967 919 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 NTN1O95631 604 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 ENO2P09104 434 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 TACSTD2P09758 323 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 DDX5P17844 614 aaKnown RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 GPX3P22352 226 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 KRT20P35900 424 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 IL2P60568 153 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 SNRPD2P62316 118 aaKnown RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 TNFRSF17Q02223 184 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 GANABQ14697 944 aaKnown RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 MLC1Q15049 377 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 TCEAL1Q15170 157 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 HIST2H2ACQ16777 129 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 ASTE1Q2TB18 679 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 VAX1Q5SQQ9 334 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 C18orf63Q68DL7 685 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 HIST2H2AA3Q6FI13 130 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 MFSD12Q6NUT3 480 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 PAQR3Q6TCH7 311 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 SLCO4C1Q6ZQN7 724 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 TBC1D1Q86TI0 1168 aaPredicted RBP10.17□□□□□ -0.78
HDAC6-233ENST00000489352 P2RY8Q86VZ1 359 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 DENND6AQ8IWF6 608 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 ZNF615Q8N8J6 731 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 TOR1AIP2Q8NFQ8 470 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 OR7G1Q8NGA0 311 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 TMEM186Q96B77 213 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 SLC6A7Q99884 636 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 EGFL8Q99944 293 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 CAPS2Q9BXY5 557 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 KRTAP17-1Q9BYP8 105 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 DSN1Q9H410 356 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 FKRPQ9H9S5 495 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 CXorf21Q9HAI6 301 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 NTN4Q9HB63 628 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 SYBUQ9NX95 663 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 BCAP29Q9UHQ4 241 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 SOX13Q9UN79 622 aa10.17□□□□□ -0.78
HDAC6-233ENST00000489352 GLOD5A6NK44 160 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 SH3BGRLO75368 114 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 LYZL6O75951 148 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 STAMBPO95630 424 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 TBX6O95947 436 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-233ENST00000489352 ERCC1P07992 297 aaPredicted RBP10.16□□□□□ -0.78
HDAC6-233ENST00000489352 NUDT17P0C025 328 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 PABPC4LP0CB38 370 aaKnown RBP10.16□□□□□ -0.78
HDAC6-233ENST00000489352 GCH1P30793 250 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 CTNNA1P35221 906 aaKnown RBP10.16□□□□□ -0.78
HDAC6-233ENST00000489352 ZNF83P51522 516 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.16□□□□□ -0.78
HDAC6-233ENST00000489352 ZSWIM7Q19AV6 140 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 TMEM35AQ53FP2 167 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 TIMM23BQ5SRD1 257 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 AADACL2Q6P093 401 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 ANKS4BQ8N8V4 417 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 ZDHHC22Q8N966 263 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 CCDC89Q8N998 374 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 OR10D3Q8NH80 312 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 LPAR2Q9HBW0 351 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 ESM1Q9NQ30 184 aa10.16□□□□□ -0.78
HDAC6-233ENST00000489352 OR6C70A6NIJ9 312 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 SAP18O00422 153 aaKnown RBP10.15□□□□□ -0.78
HDAC6-233ENST00000489352 LILRA1O75019 489 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 PRKRAO75569 313 aaKnown RBP10.15□□□□□ -0.78
HDAC6-233ENST00000489352 HAUS5O94927 633 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 GGT1P19440 569 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 NT5EP21589 574 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 FPR2P25090 351 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 CD40P25942 277 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 PIK3R1P27986 724 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 IL12BP29460 328 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 RAP1GDS1P52306 607 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 HADHBP55084 474 aaKnown RBP10.15□□□□□ -0.78
HDAC6-233ENST00000489352 SPOCK1Q08629 439 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 KLF1Q13351 362 aaPredicted RBP10.15□□□□□ -0.78
HDAC6-233ENST00000489352 DHX34Q14147 1143 aaKnown RBP10.15□□□□□ -0.78
HDAC6-233ENST00000489352 EFR3AQ14156 821 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 OR4C11Q6IEV9 310 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 C11orf63Q6NUN7 778 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 TFAP2EQ6VUC0 442 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 UBE3DQ7Z6J8 389 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 LRRC37BQ96QE4 947 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 NDNQ99608 321 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 CENPKQ9BS16 269 aa10.15□□□□□ -0.78
HDAC6-233ENST00000489352 SDHAF3Q9NRP4 125 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms