RNA–Protein interactions for RNA: ENST00000489313.1

PTP4A2-206, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 2

Gene PTP4A2, Length 1,551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-206ENST00000489313 A0A087X1B8 175 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CCDC188H7C350 402 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 SEC14L5O43304 696 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 EMC8O43402 210 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 TSPAN2O60636 221 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 PLAUP00749 431 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CT45A8P0DMV1 189 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CT45A9P0DMV2 189 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 IL12BP29460 328 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CCNG1P51959 295 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 SUCLG1P53597 346 aaKnown RBP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 GAS1P54826 345 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 ATP5J2P56134 94 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 IFT88Q13099 833 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CALCOCO2Q13137 446 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 TNK1Q13470 666 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CT45A2Q5DJT8 189 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 RAET1LQ5VY80 246 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 NPSR1Q6W5P4 371 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 LARP4Q71RC2 724 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 CCDC25Q86WR0 208 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 MEIOBQ8N635 442 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 PTGR2Q8N8N7 351 aaPredicted RBP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 OR5M1Q8NGP8 315 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 FNDC9Q8TBE3 224 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 FBF1Q8TES7 1133 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 TMEM171Q8WVE6 324 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 KAT2AQ92830 837 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 TM4SF18Q96CE8 201 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 MRRFQ96E11 262 aaKnown RBP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 PHF21BQ96EK2 531 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 SLC35A4Q96G79 324 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 NSUN5Q96P11 429 aaKnown RBP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 BTBD9Q96Q07 612 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 DSN1Q9H410 356 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 SLC12A4Q9UP95 1085 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 TNPO3Q9Y5L0 923 aaKnown RBP9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 SVEP1Q4LDE5 3571 aa9.72□□□□□ -0.85
PTP4A2-206ENST00000489313 HMX2A2RU54 273 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 RNF212BA8MTL3 300 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZSCAN12O43309 604 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 KLF4O43474 513 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 SCO2O43819 266 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 GUCY1B2O75343 617 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 GSTA2P09210 222 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 CD8BP10966 210 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 PEPDP12955 493 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 TBXA2RP21731 343 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 KRT20P35900 424 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 DSCR4P56555 118 aaPredicted RBP9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 CLDN20P56880 219 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 GALNT1Q10472 559 aaPredicted RBP9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 TRAF3Q13114 568 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 EFR3AQ14156 821 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ACAP2Q15057 778 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 PON3Q15166 354 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZNF704Q6ZNC4 412 aaPredicted RBP9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 OR4N2Q8NGD1 307 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 TRPC4APQ8TEL6 797 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 EFHD2Q96C19 240 aaPredicted RBP9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 DTNBP1Q96EV8 351 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 VSTM2LQ96N03 204 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZNF681Q96N22 645 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 GPR78Q96P69 363 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ERP44Q9BS26 406 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 LRRC1Q9BTT6 524 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ELOVL6Q9H5J4 265 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 RNF122Q9H9V4 155 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZBTB26Q9HCK0 441 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 PFDN4Q9NQP4 134 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZNF701Q9NV72 531 aaPredicted RBP9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 GRHL1Q9NZI5 618 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 PPP4R1LQ9P1A2 415 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 WHRNQ9P202 907 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 PSME2Q9UL46 239 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 PROCRQ9UNN8 238 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZNF337Q9Y3M9 751 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 ZNF780BQ9Y6R6 833 aa9.71□□□□□ -0.85
PTP4A2-206ENST00000489313 A0A096LPK6 155 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 OR2M5A3KFT3 312 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 RNF223E7ERA6 249 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 H3BML4 177 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 KLHL2O95198 593 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 PDYNP01213 254 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 PAX1P15863 534 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 HK1P19367 917 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 STX2P32856 288 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 STX5Q13190 355 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 GUSBP1Q15486 140 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 ZNF628Q5EBL2 1059 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 BEX5Q5H9J7 111 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 RPS27LQ71UM5 84 aaKnown RBP9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 CCDC116Q8IYX3 515 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 PLD6Q8N2A8 252 aaKnown RBP9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 GBP7Q8N8V2 638 aaPredicted RBP9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 FADS6Q8N9I5 356 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 OR2M3Q8NG83 312 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 OR9A2Q8NGT5 310 aa9.71□□□□□ -0.86
PTP4A2-206ENST00000489313 RNF138Q8WVD3 245 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms