RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 FBXO7Q9Y3I1 522 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 OR10H1Q9Y4A9 318 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 ASB3Q9Y575 518 aa3.54□□□□□ -1.84
XRN1-213ENST00000489241 SALL1Q9NSC2 1324 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 IGHV4-30-2A0A087WSY4 118 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 C15orf38-AP3S2A0A0A6YYH1 394 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 ESYT2A0FGR8 921 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 RNF212BA8MTL3 300 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 OR1F1O43749 312 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 DUX1O43812 170 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 BCAS1O75363 584 aaPredicted RBP3.53□□□□□ -1.84
XRN1-213ENST00000489241 PDE5AO76074 875 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 SERPINB2P05120 415 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 HOXB7P09629 217 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 RPS2P15880 293 aaKnown RBP3.53□□□□□ -1.84
XRN1-213ENST00000489241 PBLDP30039 288 aaPredicted RBP3.53□□□□□ -1.84
XRN1-213ENST00000489241 DHPSP49366 369 aaPredicted RBP3.53□□□□□ -1.84
XRN1-213ENST00000489241 CBX1P83916 185 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 LRRC74AQ0VAA2 488 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 PJVKQ0ZLH3 352 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 BNIP1Q12981 228 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 CALCOCO2Q13137 446 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 TATDN3Q17R31 274 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 MUC21Q5SSG8 566 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 AGAP7PQ5VUJ5 663 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 TAF3Q5VWG9 929 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 PYHIN1Q6K0P9 492 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 BTNL3Q6UXE8 466 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 ZNF679Q8IYX0 411 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 SAMD12Q8N8I0 201 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 OR52J3Q8NH60 311 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 RAET1EQ8TD07 263 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 NTNG2Q96CW9 530 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 RAB3CQ96E17 227 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 POM121L2Q96KW2 1035 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 PSKH2Q96QS6 385 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 IWS1Q96ST2 819 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 TRIM51Q9BSJ1 452 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 CABLES2Q9BTV7 478 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 STRADBQ9C0K7 418 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 RHOJQ9H4E5 214 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 ADGRL4Q9HBW9 690 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 ZNF446Q9NWS9 450 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 DCAF16Q9NXF7 216 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 THEGQ9P2T0 379 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 SEC14L4Q9UDX3 406 aa3.53□□□□□ -1.84
XRN1-213ENST00000489241 KIF16BQ96L93 1317 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 TRGV8A0A0C4DH27 118 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 MBLAC1A4D2B0 266 aaPredicted RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 ZSCAN12O43309 604 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 ANP32DO95626 131 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 TRIM49P0CI25 452 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 TRIM49CP0CI26 452 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 CPN1P15169 458 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 NT5EP21589 574 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 UQCRC2P22695 453 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 PSMA2P25787 234 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 CALML3P27482 149 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 VEGFCP49767 419 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 PPT1P50897 306 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 NDUFV3P56181 108 aaKnown RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 SRPXP78539 464 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 FASTKD3Q14CZ7 662 aaKnown RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 NECTIN1Q15223 517 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 RABL6Q3YEC7 729 aaPredicted RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 PRR5LQ6MZQ0 368 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 DPY19L4Q7Z388 723 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 PARGQ86W56 976 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 ZNF491Q8N8L2 437 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 EIF1ADQ8N9N8 165 aaKnown RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 NANPQ8TBE9 248 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 SPRYD4Q8WW59 207 aaPredicted RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 AKR1E2Q96JD6 320 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 ELMO2Q96JJ3 720 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 FAM173AQ9BQD7 235 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 MCRIP2Q9BUT9 160 aaKnown RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 SLC25A51Q9H1U9 297 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 VCX2Q9H322 139 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 MOB1AQ9H8S9 216 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 POLD4Q9HCU8 107 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 UTP6Q9NYH9 597 aaKnown RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 GSTK1Q9Y2Q3 226 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 DHRS7Q9Y394 339 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 EXOSC1Q9Y3B2 195 aaKnown RBP3.52□□□□□ -1.85
XRN1-213ENST00000489241 PTCH1Q13635 1447 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 ATP10DQ9P241 1426 aa3.52□□□□□ -1.85
XRN1-213ENST00000489241 PPIAL4CA0A0B4J2A2 164 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 BCLAF3A2AJT9 711 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 GSAPA4D1B5 854 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 CASKO14936 926 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 TM9SF1O15321 606 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 DCXO43602 365 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 SURF6O75683 361 aaKnown RBP3.51□□□□□ -1.85
XRN1-213ENST00000489241 ADCY5O95622 1261 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 OPN1LWP04000 364 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 FCGR3AP08637 254 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 PPIAL4GP0DN37 164 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 ANXA3P12429 323 aa3.51□□□□□ -1.85
XRN1-213ENST00000489241 XRCC1P18887 633 aaPredicted RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms