RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 PGFP49763 221 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 BCAP31P51572 246 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 NDST2P52849 883 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 OR1D5P58170 312 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZP1P60852 638 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 OTUD4Q01804 1114 aaKnown RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GAGE1Q13065 139 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GAGE4Q13068 117 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF177Q13360 481 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MTX1Q13505 466 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 C1orf61Q13536 156 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 TFDP1Q14186 410 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CRMP1Q14194 572 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GRB14Q14449 540 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 HNF4GQ14541 408 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 KIR2DS5Q14953 304 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 HSDL1Q3SXM5 330 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 SLC35D3Q5M8T2 416 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 AP1ARQ63HQ0 302 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF626Q68DY1 528 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 DMKNQ6E0U4 476 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RHBDD2Q6NTF9 364 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 KCNIP4Q6PIL6 250 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 VITQ6UXI7 678 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM64Q6YI46 380 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 NET1Q7Z628 596 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GPBP1Q86WP2 473 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 PALB2Q86YC2 1186 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 TBC1D10CQ8IV04 446 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MFSD6LQ8IWD5 586 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GABRG1Q8N1C3 465 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 FBXL16Q8N461 479 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 PNLDC1Q8NA58 520 aaKnown RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MFSD9Q8NBP5 474 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RDH11Q8TC12 318 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF596Q8TC21 504 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 PHLDA1Q8WV24 401 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 TCP11Q8WWU5 503 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 PIBF1Q8WXW3 757 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ARNTL2Q8WYA1 636 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MYLPFQ96A32 169 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 C10orf35Q96D05 121 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 UHRF2Q96PU4 802 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 TRNT1Q96Q11 434 aaKnown RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ERGIC2Q96RQ1 377 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CSF3RQ99062 836 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 KCNS3Q9BQ31 491 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CENPKQ9BS16 269 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 FRMD8P1Q9BZ68 369 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 CXXC4Q9H2H0 198 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 SMYD3Q9H7B4 428 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GPN2Q9H9Y4 310 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 UBTD1Q9HAC8 227 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 POLD4Q9HCU8 107 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 FGF21Q9NSA1 209 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MAN2C1Q9NTJ4 1040 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 C20orf96Q9NUD7 363 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 TMEM30AQ9NV96 361 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MED17Q9NVC6 651 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 RNF186Q9NXI6 227 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 GPR83Q9NYM4 423 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MSRB1Q9NZV6 116 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZNF319Q9P2F9 582 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 STX18Q9P2W9 335 aaKnown RBP3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MBD2Q9UBB5 411 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ZDHHC2Q9UIJ5 367 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 ABCG2Q9UNQ0 655 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 MEMO1Q9Y316 297 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 COLEC10Q9Y6Z7 277 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 SNED1Q8TER0 1413 aa3.01□□□□□ -1.93
PRPF4-203ENST00000488937 FRMPD3Q5JV73 1810 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 WDR17Q8IZU2 1322 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 AK9Q5TCS8 1911 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 A0A1W2PPV9 198 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 GSTTP1A0A1W2PQM5 241 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 MEX3AA1L020 520 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 SHISA7A6NL88 538 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 A8MU76 341 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 P2RY10O00398 339 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 DLGAP1O14490 977 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SH2D1BO14796 132 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 LSM1O15116 133 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 EIF3HO15372 352 aaKnown RBP eCLIP3□□□□□ -1.93
PRPF4-203ENST00000488937 TAPBPO15533 448 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 LATO43561 262 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 ITM2AO43736 263 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 PRKAB2O43741 272 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 SRPX2O60687 465 aaPredicted RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 TPST2O60704 377 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 WDR1O75083 606 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 KHDRBS3O75525 346 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 PRKRAO75569 313 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 KRT33AO76009 404 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 CDK14O94921 469 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 IGHG3P01860 377 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 MBP02144 154 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 GAPDHP04406 335 aaKnown RBP3□□□□□ -1.93
PRPF4-203ENST00000488937 TFAP2AP05549 437 aa3□□□□□ -1.93
PRPF4-203ENST00000488937 FCER2P06734 321 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms