RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PROK2Q9HC23 129 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 MED4Q9NPJ6 270 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 SIRT3Q9NTG7 399 aaPredicted RBP13.81□□□□□ -0.2
CXCL12-207ENST00000488591 KLRF1Q9NZS2 232 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 SLC5A6Q9Y289 635 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 GPR45Q9Y5Y3 372 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 BAHCC1Q9P281 2608 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 ZGRF1Q86YA3 2104 aa13.81□□□□□ -0.2
CXCL12-207ENST00000488591 FLNCQ14315 2725 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 EXPH5Q8NEV8 1989 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 PRSS51A0A1B0GVH4 220 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 PRAMEF25A6NGN4 478 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 E9PBE3 544 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 ZNF195O14628 629 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 ANKRD28O15084 1053 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 POLR3GO15318 223 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-207ENST00000488591 SLC19A2O60779 497 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 TRIM3O75382 744 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-207ENST00000488591 WISP2O76076 250 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 PDE9AO76083 593 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 SOX30O94993 753 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 KRT16P08779 473 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 STSP08842 583 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 ABOP16442 354 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 CLK3P49761 638 aaKnown RBP13.8□□□□□ -0.2
CXCL12-207ENST00000488591 PER3P56645 1201 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 UFM1P61960 85 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 C4orf17Q53FE4 359 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 BICRALQ6AI39 1079 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 MFSD12Q6NUT3 480 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 ARHGAP11AQ6P4F7 1023 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 SPPL2CQ8IUH8 684 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 GLB1L3Q8NCI6 653 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-207ENST00000488591 SFXN5Q8TD22 340 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 JADE3Q92613 823 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 EFHD2Q96C19 240 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-207ENST00000488591 CHMP6Q96FZ7 201 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 OSBPL11Q9BXB4 747 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 LDAHQ9H6V9 325 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 CXorf36Q9H7Y0 433 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 ZDHHC11Q9H8X9 412 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 QPCTLQ9NXS2 382 aa13.8□□□□□ -0.2
CXCL12-207ENST00000488591 FAF1Q9UNN5 650 aaPredicted RBP13.8□□□□□ -0.2
CXCL12-207ENST00000488591 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 TRGV8A0A0C4DH27 118 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 A0A1B0GTH9 108 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 CLEC18AA5D8T8 446 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 ICOSLGO75144 302 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 SLC22A3O75751 556 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 NKX2-2O95096 273 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 IL33O95760 270 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 HMGN2P05204 90 aaKnown RBP13.79□□□□□ -0.2
CXCL12-207ENST00000488591 ELAVL4P26378 380 aaKnown RBP13.79□□□□□ -0.2
CXCL12-207ENST00000488591 GDF1P27539 372 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 PTGS2P35354 604 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 SOAT1P35610 550 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 MAGEA5P43359 124 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 RFX3P48380 749 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 AQP5P55064 265 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 HBA1P69905 142 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 HSF1Q00613 529 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 LRRC74AQ0VAA2 488 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 TP53BP2Q13625 1128 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 FAM174BQ3ZCQ3 159 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 PDCD4Q53EL6 469 aaKnown RBP13.79□□□□□ -0.2
CXCL12-207ENST00000488591 SPANXN4Q5MJ08 99 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 CLEC18BQ6UXF7 455 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 CLEC18CQ8NCF0 446 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 OR4A15Q8NGL6 344 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 OR1J4Q8NGS1 313 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 HOXB13Q92826 284 aaPredicted RBP13.79□□□□□ -0.2
CXCL12-207ENST00000488591 DTNBP1Q96EV8 351 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 GIMAP5Q96F15 307 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 TMEM41AQ96HV5 264 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 OR52B2Q96RD2 323 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 ACTRT3Q9BYD9 372 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 EXO5Q9H790 373 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 TCF7L2Q9NQB0 619 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 FAM120CQ9NX05 1096 aaKnown RBP13.79□□□□□ -0.2
CXCL12-207ENST00000488591 PCDHGB3Q9Y5G1 929 aa13.79□□□□□ -0.2
CXCL12-207ENST00000488591 NINQ8N4C6 2090 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 PRRG2O14669 202 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 GNB5O14775 395 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 LRRTM2O43300 516 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 SEMA7AO75326 666 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 TRAPPC6AO75865 159 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 CPSF4O95639 269 aaKnown RBP13.78□□□□□ -0.2
CXCL12-207ENST00000488591 IL6P05231 212 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 CYP4B1P13584 511 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 MAP3K8P41279 467 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 IDH3AP50213 366 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 WNT3P56703 355 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 STX1BP61266 288 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 LASP1Q14847 261 aaKnown RBP13.78□□□□□ -0.2
CXCL12-207ENST00000488591 C1QL3Q5VWW1 255 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 TIGD3Q6B0B8 471 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 DESI1Q6ICB0 168 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 CDC73Q6P1J9 531 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 ANGPTL8Q6UXH0 198 aa13.78□□□□□ -0.2
CXCL12-207ENST00000488591 CLECL1Q8IZS7 167 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms