RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 ALOXE3Q9BYJ1 711 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 GABARAPL1Q9H0R8 117 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 PIGUQ9H490 435 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 REEP1Q9H902 201 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 ZNF304Q9HCX3 659 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 ADAP2Q9NPF8 381 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 DUSP22Q9NRW4 184 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 PCDHGB3Q9Y5G1 929 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 CLDN16Q9Y5I7 305 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 MAU2Q9Y6X3 613 aa11.85□□□□□ -0.51
NELFE-209ENST00000488426 KALRNO60229 2985 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 DSPPQ9NZW4 1301 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 ATRXP46100 2492 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 MYOCOSA0A1B0GUC4 107 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 TGFBR3LH3BV60 316 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 AHCYL1O43865 530 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 DNAJB5O75953 348 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 H6PDO95479 791 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 IFNW1P05000 195 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 ALOX5P09917 674 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 CT62P0C5K7 136 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 ACP2P11117 423 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 IST1P53990 364 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 HPCAP84074 193 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 PPP2R2BQ00005 443 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 GK3PQ14409 553 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 DUSP7Q16829 419 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 ARHGAP11BQ3KRB8 267 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 TSEN54Q7Z6J9 526 aaKnown RBP11.84□□□□□ -0.51
NELFE-209ENST00000488426 SLC16A11Q8NCK7 471 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 APOBEC4Q8WW27 367 aaKnown RBP11.84□□□□□ -0.51
NELFE-209ENST00000488426 SLC9A6Q92581 669 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 HOXB13Q92826 284 aaPredicted RBP11.84□□□□□ -0.51
NELFE-209ENST00000488426 RIT1Q92963 219 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 EPYCQ99645 322 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 SLC38A1Q9H2H9 487 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 LANCL2Q9NS86 450 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 VNN3Q9NY84 501 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 DHCR7Q9UBM7 475 aaKnown RBP11.84□□□□□ -0.51
NELFE-209ENST00000488426 SAMHD1Q9Y3Z3 626 aaKnown RBP11.84□□□□□ -0.51
NELFE-209ENST00000488426 KCNE3Q9Y6H6 103 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 ENPP4Q9Y6X5 453 aa11.84□□□□□ -0.51
NELFE-209ENST00000488426 CDC123O75794 336 aaPredicted RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 DXOO77932 396 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 TNFSF15O95150 251 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 CBX7O95931 251 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 AK1P00568 194 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 ITIH1P19827 911 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 MAP3K8P41279 467 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 OR1D4P47884 311 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 BTG2P78543 158 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 ZFP36L1Q07352 338 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 MERTKQ12866 999 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 EPS8Q12929 822 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 TRA2AQ13595 282 aaKnown RBP eCLIP11.83□□□□□ -0.52
NELFE-209ENST00000488426 ERV3-1Q14264 604 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 PDK3Q15120 406 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 DUSP5Q16690 384 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 C1QTNF12Q5T7M4 302 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 RHBDD2Q6NTF9 364 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 QSOX2Q6ZRP7 698 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 TMEM179BQ7Z7N9 219 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 CHERPQ8IWX8 916 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 SPACA3Q8IXA5 215 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 CHDHQ8NE62 594 aaPredicted RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 GPR32P1Q8NGA4 272 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 TFAP2CQ92754 450 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 CDS1Q92903 461 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 ADI1Q9BV57 179 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 ANKRD60Q9BZ19 345 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 TRIM45Q9H8W5 580 aaPredicted RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 SIDT1Q9NXL6 827 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 SH3GLB1Q9Y371 365 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 U3KQV3 271 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 CCDC88CQ9P219 2028 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 FASNP49327 2511 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 SYNDIG1LA6NDD5 238 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 PRAMEF25A6NGN4 478 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 A8MVJ9 347 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 DIRAS1O95057 198 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 RECKO95980 971 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 THRBP10828 461 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 RHCEP18577 417 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 TNFRSF1BP20333 461 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 MAOAP21397 527 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 S1PR1P21453 382 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 ETV5P41161 510 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 OR1E2P47887 323 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 TLE3Q04726 772 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 EXOSC7Q15024 291 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 RFX4Q33E94 735 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 ARHGAP40Q5TG30 622 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 DGAT2L6Q6ZPD8 337 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 BPHLQ86WA6 291 aaPredicted RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 SLITRK4Q8IW52 837 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 RCBTB1Q8NDN9 531 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 SIMC1Q8NDZ2 872 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 OR6C1Q96RD1 312 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 PIP5K1AQ99755 562 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 PINK1Q9BXM7 581 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms