RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 POP4O95707 220 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 RALAP11233 206 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 CYP11B1P15538 503 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 MT3P25713 68 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 OXTRP30559 389 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 MAT2AP31153 395 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 PRDX2P32119 198 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 GPC3P51654 580 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 POLR2FP61218 127 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 SRPXP78539 464 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 HTD2P86397 168 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 SNX1Q13596 522 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 PDIA5Q14554 519 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 EMC2Q15006 297 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 HKDC1Q2TB90 917 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 TTC31Q49AM3 519 aaPredicted RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 MUC21Q5SSG8 566 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 C12orf60Q5U649 245 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 RHBDD2Q6NTF9 364 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 CWC27Q6UX04 472 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 UNC5DQ6UXZ4 953 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 CATSPER4Q7RTX7 472 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 GPR142Q7Z601 462 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 SYVN1Q86TM6 617 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 ADCK1Q86TW2 530 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 AMZ2Q86W34 360 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF781Q8N8C0 355 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 MLKLQ8NB16 471 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 MINDY2Q8NBR6 621 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 OR1B1Q8NGR6 318 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 DQX1Q8TE96 717 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 FCGR1BQ92637 280 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 HPF1Q9NWY4 346 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 EIF3KQ9UBQ5 218 aaKnown RBP4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 MUTYHQ9UIF7 546 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF175Q9Y473 711 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 KDM3BQ7LBC6 1761 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 BRCA2P51587 3418 aa4.07□□□□□ -1.76
PRPF38A-203ENST00000487160 HTTP42858 3142 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ATP8B3O60423 1300 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 IGLV4-3A0A075B6K6 122 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 A8MXK9 166 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 EPM2AB3EWF7 344 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 NTN3O00634 580 aaPredicted RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 DCXO43602 365 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 AKR7A3O95154 331 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 TRIM16O95361 564 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 OR9G9P0C7N8 305 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 CALRP27797 417 aaKnown RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 CAPGP40121 348 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 EPS15P42566 896 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ATP4BP51164 291 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ERVK11-1P61568 191 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 FUT7Q11130 342 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ELAVL2Q12926 359 aaKnown RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 SLC39A6Q13433 755 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ZKSCAN8Q15776 578 aaPredicted RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 POM121L1PQ3SYA9 428 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 UNC50Q53HI1 259 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 DOK6Q6PKX4 331 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF497Q6ZNH5 498 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 NUFIP2Q7Z417 695 aaKnown RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ERC1Q8IUD2 1116 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 CCDC71Q8IV32 467 aaPredicted RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 FAM71CQ8NEG0 241 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 MIPOL1Q8TD10 442 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 LRRC15Q8TF66 581 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 CHPT1Q8WUD6 406 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF599Q96NL3 588 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 NDUFAF3Q9BU61 184 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 LRRC61Q9BV99 259 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 NMNAT2Q9BZQ4 307 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 FAM124BQ9H5Z6 455 aaPredicted RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ROPN1Q9HAT0 212 aaPredicted RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 TUBGCP4Q9UGJ1 667 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 IKZF3Q9UKT9 509 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ZNF346Q9UL40 294 aaKnown RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 KLF2Q9Y5W3 355 aaPredicted RBP4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 LAMB1P07942 1786 aa4.06□□□□□ -1.76
PRPF38A-203ENST00000487160 ANKRD36CQ5JPF3 1778 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 K7ERI5 159 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 FRAT2O75474 233 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 HPRP00739 348 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 IGHG1P01857 330 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 RNF224P0DH78 156 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 CCND2P30279 289 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 MATKP42679 507 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 MAGEA4P43358 317 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 TNNT2P45379 298 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 RIDAP52758 137 aaKnown RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 CD300CQ08708 224 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 ENPP2Q13822 863 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 SIX1Q15475 284 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 HAGHQ16775 308 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 WDR25Q64LD2 544 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 DPY19L2P2Q6ZN68 376 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 USP50Q70EL3 339 aaPredicted RBP4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 RPAINQ86UA6 219 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 RNF130Q86XS8 419 aa4.05□□□□□ -1.76
PRPF38A-203ENST00000487160 KRTAP7-1Q8IUC3 87 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms