RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 RPH3AQ9Y2J0 694 aaPredicted RBP22.29■■□□□ 1.16
LIME1-206ENST00000487026 OR10H1Q9Y4A9 318 aa22.29■■□□□ 1.16
LIME1-206ENST00000487026 HRNRQ86YZ3 2850 aaPredicted RBP22.29■■□□□ 1.16
LIME1-206ENST00000487026 ITPR3Q14573 2671 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 MPDZO75970 2070 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 FAM221AA4D161 298 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 SMIM23A6NLE4 172 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 A6NNC1 897 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 CRCPO75575 148 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 TMIGD3P0DMS9 266 aaPredicted RBP22.28■■□□□ 1.16
LIME1-206ENST00000487026 CD1EP15812 388 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 GRK2P25098 689 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 TACR1P25103 407 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 SRD5A2P31213 254 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 OPRM1P35372 400 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 PEX19P40855 299 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 MC3RP41968 323 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 PNLIPRP2P54317 469 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 GAS1P54826 345 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 PSG6Q00889 435 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 ENPP6Q6UWR7 440 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 TMEM107Q6UX40 140 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 PUM2Q8TB72 1066 aaKnown RBP eCLIP22.28■■□□□ 1.16
LIME1-206ENST00000487026 FAM222BQ8WU58 562 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 G6PC3Q9BUM1 346 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 MIEF1Q9NQG6 463 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 FOXD3Q9UJU5 478 aaPredicted RBP22.28■■□□□ 1.16
LIME1-206ENST00000487026 DKKL1Q9UK85 242 aa22.28■■□□□ 1.16
LIME1-206ENST00000487026 CLCA1A8K7I4 914 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 ZIC3O60481 467 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 PLIN3O60664 434 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 GSTM5P46439 218 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 LHX2P50458 406 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 CFAP157Q5JU67 520 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 FRMD7Q6ZUT3 714 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 INTS12Q96CB8 462 aaKnown RBP22.27■■□□□ 1.16
LIME1-206ENST00000487026 SFXN2Q96NB2 322 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 STMN4Q9H169 189 aaPredicted RBP22.27■■□□□ 1.16
LIME1-206ENST00000487026 GLIPR2Q9H4G4 154 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 JKAMPQ9P055 326 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 C2CD3Q4AC94 2353 aa22.27■■□□□ 1.16
LIME1-206ENST00000487026 MTORP42345 2549 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 TUBAL3A6NHL2 446 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 SCO2O43819 266 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 IL18BPO95998 194 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 DPP4P27487 766 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 RIPPLY3P57055 190 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 NOXRED1Q6NXP6 359 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 TRIM46Q7Z4K8 759 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 ADGRE4PQ86SQ3 457 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 CDC20BQ86Y33 519 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 CCDC63Q8NA47 563 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 RNF138Q8WVD3 245 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 UBLCP1Q8WVY7 318 aaPredicted RBP22.26■■□□□ 1.15
LIME1-206ENST00000487026 DSN1Q9H410 356 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 MYNNQ9NPC7 610 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 FLRT3Q9NZU0 649 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 ST6GALNAC2Q9UJ37 374 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 GRID1Q9ULK0 1009 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 C19orf53Q9UNZ5 99 aaPredicted RBP22.26■■□□□ 1.15
LIME1-206ENST00000487026 PRRC2AP48634 2157 aaKnown RBP22.26■■□□□ 1.15
LIME1-206ENST00000487026 ZFHX3Q15911 3703 aa22.26■■□□□ 1.15
LIME1-206ENST00000487026 UPK1AO00322 258 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 PLOD2O00469 737 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 RCBTB2O95199 551 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 CCT5P48643 541 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 CLDN18P56856 261 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 DNAJB13P59910 316 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 GAB1Q13480 694 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 CCDC153Q494R4 210 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 CLEC6AQ6EIG7 209 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 AAGABQ6PD74 315 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 LUZP2Q86TE4 346 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 KIF18BQ86Y91 864 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 GCNT2Q8N0V5 402 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 OR4K17Q8NGC6 315 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 GOT1L1Q8NHS2 421 aaPredicted RBP22.25■■□□□ 1.15
LIME1-206ENST00000487026 RMND5BQ96G75 393 aaPredicted RBP22.25■■□□□ 1.15
LIME1-206ENST00000487026 EGLN2Q96KS0 407 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 RRAGDQ9NQL2 400 aaPredicted RBP22.25■■□□□ 1.15
LIME1-206ENST00000487026 OXSMQ9NWU1 459 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 TAS2R7Q9NYW3 318 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 PLEKHA6Q9Y2H5 1048 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 PTGDR2Q9Y5Y4 395 aa22.25■■□□□ 1.15
LIME1-206ENST00000487026 A0A087WV62 115 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 COQ9O75208 318 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 SEC22BO75396 215 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 EPXP11678 715 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 CPA3P15088 417 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 EVI2BP34910 448 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 CRHR1P34998 444 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 PSPHP78330 225 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 DAZAP2Q15038 168 aaPredicted RBP22.24■■□□□ 1.15
LIME1-206ENST00000487026 WNT2BQ93097 391 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 GFM2Q969S9 779 aaKnown RBP22.24■■□□□ 1.15
LIME1-206ENST00000487026 AMDHD1Q96NU7 426 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 TM9SF2Q99805 663 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 MED11Q9P086 117 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 PPP4R1LQ9P1A2 415 aa22.24■■□□□ 1.15
LIME1-206ENST00000487026 CLCF1Q9UBD9 225 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms