RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 TLDC2A0PJX2 215 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 CD8B2A6NJW9 211 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 RGS14O43566 566 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 TBX19O60806 448 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 SEC22BO75396 215 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 CHEK2O96017 543 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 JUNP05412 331 aaKnown RBP13.13□□□□□ -0.31
CLDN11-207ENST00000486975 FGF4P08620 206 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 BMP7P18075 431 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 CEACAM8P31997 349 aaPredicted RBP13.13□□□□□ -0.31
CLDN11-207ENST00000486975 GCKP35557 465 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 TIMP3P35625 211 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 NCBP2P52298 156 aaKnown RBP eCLIP13.13□□□□□ -0.31
CLDN11-207ENST00000486975 PSG6Q00889 435 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 PRSS53Q2L4Q9 553 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 EIPR1Q53HC9 387 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 KANK2Q63ZY3 851 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 NSUN5P2Q63ZY6 315 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 WDR93Q6P2C0 686 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 Q6ZSR9 355 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 LIX1LQ8IVB5 337 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 CLYBLQ8N0X4 340 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 FAM83FQ8NEG4 500 aaPredicted RBP13.13□□□□□ -0.31
CLDN11-207ENST00000486975 OR2W6PQ8NHA6 318 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 CDC26Q8NHZ8 85 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 AENQ8WTP8 325 aaKnown RBP13.13□□□□□ -0.31
CLDN11-207ENST00000486975 AMDHD1Q96NU7 426 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 ADOQ96SZ5 270 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 UGT2B28Q9BY64 529 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 GLIPR2Q9H4G4 154 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 LRTM1Q9HBL6 345 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 KCNN3Q9UGI6 736 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 WIF1Q9Y5W5 379 aa13.13□□□□□ -0.31
CLDN11-207ENST00000486975 HCFC1P51610 2035 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 PDZD2O15018 2839 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 TTC36A6NLP5 189 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 NPHS1O60500 1241 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 CPN1P15169 458 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 TACR1P25103 407 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 IL12BP29460 328 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 MC3RP41968 323 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 TLE4Q04727 773 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 CYP27C1Q4G0S4 372 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 WIPI1Q5MNZ9 446 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 LARP4Q71RC2 724 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 PLCZ1Q86YW0 608 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 SLC44A2Q8IWA5 706 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 OR2T11Q8NH01 316 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 CAVIN3Q969G5 261 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 ABTB1Q969K4 478 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 ELP4Q96EB1 424 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 WDYHV1Q96HA8 205 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 TUBB1Q9H4B7 451 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 SERHLQ9NQF3 203 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 DDX18Q9NVP1 670 aaKnown RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 ZNF629Q9UEG4 869 aaPredicted RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 MAPRE3Q9UPY8 281 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 SLC6A5Q9Y345 797 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 TMED5Q9Y3A6 229 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 MRPS18CQ9Y3D5 142 aaKnown RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 DNAJC15Q9Y5T4 150 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 INTS1Q8N201 2190 aaKnown RBP13.12□□□□□ -0.31
CLDN11-207ENST00000486975 POLQO75417 2590 aa13.12□□□□□ -0.31
CLDN11-207ENST00000486975 MBD3L4A6NDZ8 208 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 MBD3L3A6NE82 208 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 MBD3L5A6NJ08 208 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 UPK1AO00322 258 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 LSM1O15116 133 aaKnown RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 NME6O75414 186 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 ALDH3A1P30838 453 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 SRD5A2P31213 254 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 SERPINB5P36952 375 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 PEX19P40855 299 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 GAS1P54826 345 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 IFFO1Q0D2I5 559 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 ZNF155Q12901 538 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 PDE7AQ13946 482 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 TOMM20Q15388 145 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 FBXL19-AS1Q494R0 122 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 LINC01559Q495D7 138 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 DCST1Q5T197 706 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 TMEM107Q6UX40 140 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 YRDCQ86U90 279 aaKnown RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 MBD3L2Q8NHZ7 208 aaPredicted RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 EGLN2Q96KS0 407 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 FAM111AQ96PZ2 611 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 LMF2Q9BU23 707 aaKnown RBP13.11□□□□□ -0.31
CLDN11-207ENST00000486975 TMEM109Q9BVC6 243 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 CALHM2Q9HA72 323 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 ABCG2Q9UNQ0 655 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 OR10H1Q9Y4A9 318 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 PTGDR2Q9Y5Y4 395 aa13.11□□□□□ -0.31
CLDN11-207ENST00000486975 ANKHD1Q8IWZ3 2542 aaKnown RBP13.1□□□□□ -0.31
CLDN11-207ENST00000486975 CCDC168Q8NDH2 2452 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 DVL2O14641 736 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 PDPK1O15530 556 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 CHRNGP07510 517 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 SDC1P18827 310 aa13.1□□□□□ -0.31
CLDN11-207ENST00000486975 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms