RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 FAM120BQ96EK7 910 aaKnown RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 HSPBAP1Q96EW2 488 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 THOC1Q96FV9 657 aaKnown RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 MAGED4Q96JG8 741 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 SGCZQ96LD1 299 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 PRPF18Q99633 342 aaKnown RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 SLX1AQ9BQ83 275 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 LMF2Q9BU23 707 aaKnown RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 CCDC28BQ9BUN5 200 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 PROK2Q9HC23 129 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 TIMMDC1Q9NPL8 285 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 SUCOQ9UBS9 1254 aaKnown RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 CNOT11Q9UKZ1 510 aaKnown RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 KLF13Q9Y2Y9 288 aaPredicted RBP11.86□□□□□ -0.51
SSR4-211ENST00000486204 ARHGAP21Q5T5U3 1957 aa11.86□□□□□ -0.51
SSR4-211ENST00000486204 NIPBLQ6KC79 2804 aaeCLIP11.85□□□□□ -0.51
SSR4-211ENST00000486204 RNASET2O00584 256 aaKnown RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 UBDO15205 165 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 POLR3GO15318 223 aaPredicted RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 EMC8O43402 210 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 ABCB1P08183 1280 aaPredicted RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 CD99P14209 185 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 NAGAP17050 411 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 MDH1P40925 334 aaKnown RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 MEOX1P50221 254 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 NRG3P56975 720 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 FBXW4P57775 412 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 GPR85P60893 370 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 SRSF11Q05519 484 aaKnown RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 RPS6KA2Q15349 733 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 PGS1Q32NB8 556 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 FAM174BQ3ZCQ3 159 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 DESI1Q6ICB0 168 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 ACAD11Q709F0 780 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 CPSF7Q8N684 471 aaKnown RBP11.85□□□□□ -0.51
SSR4-211ENST00000486204 NUP43Q8NFH3 380 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 OR4N2Q8NGD1 307 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 OR9I1Q8NGQ6 314 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 HGDQ93099 445 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 OMA1Q96E52 524 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 MS4A4EQ96PG1 132 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 NEUROD4Q9HD90 331 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 NPHS2Q9NP85 383 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 FGFR1OP2Q9NVK5 253 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 ZIM2Q9NZV7 527 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 HEATR5AQ86XA9 2040 aa11.85□□□□□ -0.51
SSR4-211ENST00000486204 G3V3Y1 287 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 PEX1O43933 1283 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 TSPAN2O60636 221 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 UGT2B11O75310 529 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 PPM1BO75688 479 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 WISP2O76076 250 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 ACP2P11117 423 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 MST1P26927 711 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 TMED10P49755 219 aaKnown RBP11.84□□□□□ -0.51
SSR4-211ENST00000486204 DGKQP52824 942 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 PLCXD2Q0VAA5 305 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 RNFT1Q5M7Z0 435 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 MFSD12Q6NUT3 480 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 FAM180AQ6UWF9 173 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 ANKRD46Q86W74 232 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 SLC44A2Q8IWA5 706 aaPredicted RBP11.84□□□□□ -0.51
SSR4-211ENST00000486204 FBXW8Q8N3Y1 598 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 BCORP1Q8N888 145 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 ZFP62Q8NB50 900 aaPredicted RBP11.84□□□□□ -0.51
SSR4-211ENST00000486204 FAM13CQ8NE31 585 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 OR2M7Q8NG81 312 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 SPPL2AQ8TCT8 520 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 SFXN5Q8TD22 340 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 RNF138Q8WVD3 245 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 NR4A3Q92570 626 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 TMBIM1Q969X1 311 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 SLC35A4Q96G79 324 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 CCDC120Q96HB5 630 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 ZNF385DQ9H6B1 395 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 C3orf14Q9HBI5 128 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 EQTNQ9NQ60 294 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 SACM1LQ9NTJ5 587 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 ZCCHC3Q9NUD5 404 aaKnown RBP11.84□□□□□ -0.51
SSR4-211ENST00000486204 GPATCH2Q9NW75 528 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 FAM120CQ9NX05 1096 aaKnown RBP11.84□□□□□ -0.51
SSR4-211ENST00000486204 PHF3Q92576 2039 aaKnown RBP11.84□□□□□ -0.51
SSR4-211ENST00000486204 MED12Q93074 2177 aa11.84□□□□□ -0.51
SSR4-211ENST00000486204 PRSS51A0A1B0GVH4 220 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 OR6C70A6NIJ9 312 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 SLC22A3O75751 556 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 NKX2-2O95096 273 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 HMGN2P05204 90 aaKnown RBP11.83□□□□□ -0.52
SSR4-211ENST00000486204 PGRP06401 933 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 CNR1P21554 472 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 S100A3P33764 101 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 PIGAP37287 484 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 DNASE1L1P49184 302 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 CCT3P49368 545 aaKnown RBP11.83□□□□□ -0.52
SSR4-211ENST00000486204 PSPHP78330 225 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 PRR5P85299 388 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 FOXO1Q12778 655 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 GAB1Q13480 694 aa11.83□□□□□ -0.52
SSR4-211ENST00000486204 PRAMEF20Q5VT98 475 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms