RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 MAP10Q9P2G4 905 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 B4GALT7Q9UBV7 327 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ADAM21Q9UKJ8 722 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 BOKQ9UMX3 212 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 LIPT1Q9Y234 373 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 AP3M1Q9Y2T2 418 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 CAPN7Q9Y6W3 813 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 UBR5O95071 2799 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 DOPEY2Q9Y3R5 2298 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CLEC18AA5D8T8 446 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 ANKRD33BA6NCL7 494 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 TMEM200CA6NKL6 621 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 ACOT7O00154 380 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NDUFAB1O14561 156 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 PRKNO60260 465 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NME2P1O60361 137 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 SNX3O60493 162 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NEURL1O76050 574 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 OR6B1O95007 311 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NKX2-2O95096 273 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 PSMG1O95456 288 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 FAM107AO95990 144 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 F10P00742 488 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CLPSP04118 112 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CT45A8P0DMV1 189 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CT45A9P0DMV2 189 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 EFNA1P20827 205 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 DRD4P21917 467 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NME2P22392 152 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 GCKP35557 465 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 PIGAP37287 484 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 KHKP50053 298 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 MNAT1P51948 309 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 SEC24CP53992 1094 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 GYS2P54840 703 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 WNT3P56703 355 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 KCNJ2P63252 427 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 POU6F2P78424 691 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 DUSP2Q05923 314 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 GAB1Q13480 694 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CYLC2Q14093 348 aaPredicted RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 LASP1Q14847 261 aaKnown RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 PRSS53Q2L4Q9 553 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CT45A2Q5DJT8 189 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 COQ5Q5HYK3 327 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 SLC30A6Q6NXT4 461 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CLEC18BQ6UXF7 455 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 C16orf62Q7Z3J2 963 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 SLC22A16Q86VW1 577 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 ATCAYQ86WG3 371 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CLECL1Q8IZS7 167 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CLEC18CQ8NCF0 446 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 PSD4Q8NDX1 1056 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 MDS2Q8NDY4 140 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CATSPER1Q8NEC5 780 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 MIPOL1Q8TD10 442 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 OIT3Q8WWZ8 545 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 DIO2Q92813 273 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 TMBIM1Q969X1 311 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NEURL3Q96EH8 262 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 SCMH1Q96GD3 660 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 TEX37Q96LM6 180 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 LRRC37BQ96QE4 947 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 PHF12Q96QT6 1004 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CCT8L2Q96SF2 557 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 FAM173AQ9BQD7 235 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CXorf36Q9H7Y0 433 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 LIN28AQ9H9Z2 209 aaKnown RBP7.62□□□□□ -1.19
SF3A1-208ENST00000485618 SAR1AQ9NR31 198 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 KLHL1Q9NR64 748 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 FAM53CQ9NYF3 392 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 CALML5Q9NZT1 146 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 ABCG2Q9UNQ0 655 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 MYO9AB2RTY4 2548 aa7.62□□□□□ -1.19
SF3A1-208ENST00000485618 NUP214P35658 2090 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 SCDO00767 359 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 PEX1O43933 1283 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 SCN2BO60939 215 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 STX11O75558 287 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 IL33O95760 270 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 PDGFAP04085 211 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 ELAVL4P26378 380 aaKnown RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 IL12AP29459 219 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 PTGER1P34995 402 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 MASP1P48740 699 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 CORO7P57737 925 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 PLGLB1Q02325 96 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 ELOAQ14241 798 aaKnown RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 NNATQ16517 81 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 NADK2Q4G0N4 442 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 KRTCAP3Q53RY4 240 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 BNC2Q6ZN30 1099 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 C16orf47Q6ZP98 133 aaPredicted RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 GALNTL5Q7Z4T8 443 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 MTDHQ86UE4 582 aaKnown RBP7.61□□□□□ -1.19
SF3A1-208ENST00000485618 MISPQ8IVT2 679 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 FBXW8Q8N3Y1 598 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 METTL25Q8N6Q8 603 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 OR10G3Q8NGC4 313 aa7.61□□□□□ -1.19
SF3A1-208ENST00000485618 OR5M3Q8NGP4 307 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms