RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 TMIGD2Q96BF3 282 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 PSKH2Q96QS6 385 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 SIKE1Q9BRV8 207 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 TBC1D10AQ9BXI6 508 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 POLR1EQ9GZS1 481 aaKnown RBP3.38□□□□□ -1.87
FN1-222ENST00000485567 UPF3AQ9H1J1 476 aaKnown RBP3.38□□□□□ -1.87
FN1-222ENST00000485567 XKR8Q9H6D3 395 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 ACTR8Q9H981 624 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 LRRC40Q9H9A6 602 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 DEPPQ9NTK1 212 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 GTSE1Q9NYZ3 720 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 THAP10Q9P2Z0 257 aaPredicted RBP3.38□□□□□ -1.87
FN1-222ENST00000485567 CIDEBQ9UHD4 219 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 RARRES3Q9UL19 164 aa3.38□□□□□ -1.87
FN1-222ENST00000485567 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.38□□□□□ -1.87
FN1-222ENST00000485567 AKNAQ7Z591 1439 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 RNF222A6NCQ9 220 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 RNF212BA8MTL3 300 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 VGLL3A8MV65 326 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 NTN3O00634 580 aaPredicted RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 CASC3O15234 703 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 MAPK13O15264 365 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LINC01565O15544 149 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 MED7O43513 233 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LANCL1O43813 399 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 IDH3BO43837 385 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 TRIM49P0CI25 452 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 TRIM49CP0CI26 452 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 RNF224P0DH78 156 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 PTBP1P26599 531 aaKnown RBP eCLIP3.37□□□□□ -1.87
FN1-222ENST00000485567 AXLP30530 894 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 CCT6AP40227 531 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 VCPP55072 806 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 PEX3P56589 373 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 HILS1P60008 231 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 EIF3EP60228 445 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 CTAG1AP78358 180 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 SPIBQ01892 262 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LIPEQ05469 1076 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 SNTB2Q13425 540 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 LRRC23Q53EV4 343 aaPredicted RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 SPATA46Q5T0L3 261 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 AGAP7PQ5VUJ5 663 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 WDR25Q64LD2 544 aaPredicted RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 ADAM5Q6NVV9 412 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 FAAP20Q6NZ36 180 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LRRC8BQ6P9F7 803 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 ZNF613Q6PF04 617 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 METAP1DQ6UB28 335 aaPredicted RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 ATRAIDQ6UW56 229 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 FAM9CQ8IZT9 166 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 TTC5Q8N0Z6 440 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 ZNF781Q8N8C0 355 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 FAM184AQ8NB25 1140 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 OR2T3Q8NH03 318 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 OR8K3Q8NH51 312 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 MIPOL1Q8TD10 442 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LRRC15Q8TF66 581 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 DLX4Q92988 240 aaPredicted RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 SLC25A36Q96CQ1 311 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 NAF1Q96HR8 494 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 ATP6V1G3Q96LB4 118 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LINC00479Q96M42 142 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 RIOK1Q9BRS2 568 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 MCRIP2Q9BUT9 160 aaKnown RBP3.37□□□□□ -1.87
FN1-222ENST00000485567 GON7Q9BXV9 100 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 KRTAP1-5Q9BYS1 174 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 LRRCC1Q9C099 1032 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 MOB1AQ9H8S9 216 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 SCRT2Q9NQ03 307 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 YAE1D1Q9NRH1 226 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.37□□□□□ -1.874e-40■□□□□ 11.2
FN1-222ENST00000485567 MBD2Q9UBB5 411 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 CHRNA9Q9UGM1 479 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 EMCNQ9ULC0 261 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.37□□□□□ -1.87
FN1-222ENST00000485567 FOXJ3Q9UPW0 622 aa3.37□□□□□ -1.87
FN1-222ENST00000485567 IGLV4-3A0A075B6K6 122 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 A0A0U1RQV5 110 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 A0A1B0GUL7 405 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 ACOD1A6NK06 481 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 ZNF716A6NP11 495 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 PDLIM1O00151 329 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 SOCS3O14543 225 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 CYB561D2O14569 222 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 EI24O14681 340 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 ZNF749O43361 778 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 DUSP11O75319 330 aaKnown RBP3.36□□□□□ -1.87
FN1-222ENST00000485567 CTAG2O75638 210 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 TOXO94900 526 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 POP4O95707 220 aaKnown RBP3.36□□□□□ -1.87
FN1-222ENST00000485567 ECDO95905 644 aaPredicted RBP3.36□□□□□ -1.87
FN1-222ENST00000485567 TPM3P06753 285 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 SLC35G4P0C7Q5 338 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 ZNF735P0CB33 412 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 EPB41P11171 864 aaKnown RBP3.36□□□□□ -1.87
FN1-222ENST00000485567 TNNI3P19429 210 aa3.36□□□□□ -1.87
FN1-222ENST00000485567 CYP2F1P24903 491 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms