RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 SLC35C2Q9NQQ7 365 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 TIMM22Q9Y584 194 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 NAV3Q8IVL0 2385 aa17.43■□□□□ 0.38
COL27A1-205ENST00000485397 MED12LQ86YW9 2145 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 EXOC1LA0A1B0GW35 172 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 SH3D21A4FU49 640 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 A8MXE2 369 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 GOSR1O95249 250 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 ZNF708P17019 499 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 IMPDH1P20839 514 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 DPP4P27487 766 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 IL12BP29460 328 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 TIA1P31483 386 aaKnown RBP eCLIP17.42■□□□□ 0.38
COL27A1-205ENST00000485397 PNLIPRP2P54317 469 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 ACSM2AQ08AH3 577 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 PRSS53Q2L4Q9 553 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 ACSM2BQ68CK6 577 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 TIFABQ6ZNK6 161 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 GRAMD2AQ8IUY3 354 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 GBP7Q8N8V2 638 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-205ENST00000485397 RNF138Q8WVD3 245 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 MTBPQ96DY7 904 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 C16orf45Q96MC5 204 aaPredicted RBP17.42■□□□□ 0.38
COL27A1-205ENST00000485397 KCNA7Q96RP8 456 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 PIGMQ9H3S5 423 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 GIMAP4Q9NUV9 329 aa17.42■□□□□ 0.38
COL27A1-205ENST00000485397 MRPS18CQ9Y3D5 142 aaKnown RBP17.42■□□□□ 0.38
COL27A1-205ENST00000485397 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 A0A1W2PNV4 684 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 HCRTR2O43614 444 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 PLOD3O60568 738 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 TNFSF13O75888 250 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 FOSL1P15407 271 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 CHMP24386 653 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 ATP5F1P24539 256 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-205ENST00000485397 B3GALT5-AS1P59052 145 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 GAB1Q13480 694 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 HEPACAMQ14CZ8 416 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 SPIN4Q56A73 249 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 LGSNQ5TDP6 509 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 SAMD14Q8IZD0 417 aaPredicted RBP17.41■□□□□ 0.38
COL27A1-205ENST00000485397 FAM9CQ8IZT9 166 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 OR4K17Q8NGC6 315 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 ACBD3Q9H3P7 528 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 DSN1Q9H410 356 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 PACSIN3Q9UKS6 424 aa17.41■□□□□ 0.38
COL27A1-205ENST00000485397 SCO2O43819 266 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 CD53P19397 219 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 CPOXP36551 454 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 PRKAA2P54646 552 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 DIO3P55073 304 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 PSG6Q00889 435 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 P4HA3Q7Z4N8 544 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 UBQLNLQ8IYU4 475 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 C11orf24Q96F05 449 aaPredicted RBP17.4■□□□□ 0.38
COL27A1-205ENST00000485397 BBS4Q96RK4 519 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 FLRT3Q9NZU0 649 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 SENP1Q9P0U3 644 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 OR10H1Q9Y4A9 318 aa17.4■□□□□ 0.38
COL27A1-205ENST00000485397 GOLGA8RI6L899 631 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 CASKO14936 926 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 ANXA4P09525 319 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-205ENST00000485397 HOXC12P31275 282 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 MPIP34949 423 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 DSCR4P56555 118 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-205ENST00000485397 EEF1A1P68104 462 aaKnown RBP17.39■□□□□ 0.37
COL27A1-205ENST00000485397 FAM27E3Q08E93 113 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 C2orf80Q0P641 193 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 ZNF155Q12901 538 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-205ENST00000485397 LCP2Q13094 533 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 BCL2A1Q16548 175 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 SH2D4BQ5SQS7 431 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 EEF1A1P5Q5VTE0 462 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 GALNT18Q6P9A2 607 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 VWA1Q6PCB0 445 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 KRTAP1-3Q8IUG1 177 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 FADS6Q8N9I5 356 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 CDC26Q8NHZ8 85 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 ZNF592Q92610 1267 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 STARD4Q96DR4 205 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 DTNBP1Q96EV8 351 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 SMR3AQ99954 134 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 STMN4Q9H169 189 aaPredicted RBP17.39■□□□□ 0.37
COL27A1-205ENST00000485397 NEUROD4Q9HD90 331 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 TAS2R9Q9NYW1 312 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 MED11Q9P086 117 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 PPP4R1LQ9P1A2 415 aa17.39■□□□□ 0.37
COL27A1-205ENST00000485397 MAP1AP78559 2803 aaPredicted RBP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 MYO1GB0I1T2 1018 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 H0YC42 278 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 SMNDC1O75940 238 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 JUNP05412 331 aaKnown RBP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 ENO1P06733 434 aaKnown RBP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 PEPDP12955 493 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 HK1P19367 917 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 DDCP20711 480 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 EVI2BP34910 448 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 MC3RP41968 323 aa17.38■□□□□ 0.37
COL27A1-205ENST00000485397 NCBP2P52298 156 aaKnown RBP eCLIP17.38■□□□□ 0.37
COL27A1-205ENST00000485397 FOXA1P55317 472 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms