RNA–Protein interactions for RNA: ENST00000484581.6

VPS13A-211, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2 BASIC

Gene VPS13A, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-211ENST00000484581 KCTD21Q4G0X4 260 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 CYBRD1Q53TN4 286 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 CELF3Q5SZQ8 465 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 PWWP2BQ6NUJ5 590 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 SYT10Q6XYQ8 523 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 KIF6Q6ZMV9 814 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 Q6ZRP5 223 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 TMEM17Q86X19 198 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 UBQLNLQ8IYU4 475 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 PCNPQ8WW12 178 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 FAM3CQ92520 227 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 FBXO32Q969P5 355 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 MYLPFQ96A32 169 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 BIRC7Q96CA5 298 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 CNRIP1Q96F85 164 aaPredicted RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 GMPPAQ96IJ6 420 aaPredicted RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 PLIN2Q99541 437 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 EPYCQ99645 322 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 CCDC77Q9BR77 488 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 TMEM43Q9BTV4 400 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 RPP25Q9BUL9 199 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 GON7Q9BXV9 100 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 SLC25A51Q9H1U9 297 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 NT5DC2Q9H857 520 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 HYPKQ9NX55 129 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 AIPL1Q9NZN9 384 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 GALPQ9UBC7 116 aa3.79□□□□□ -1.8
VPS13A-211ENST00000484581 PTBP2Q9UKA9 531 aaKnown RBP3.79□□□□□ -1.8
VPS13A-211ENST00000484581 ATP10DQ9P241 1426 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 TRAV26-1A0A087WT03 109 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 TRBV5-4A0A0C4DH59 114 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 BCLAF3A2AJT9 711 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 MEIOCA2RUB1 952 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 PCP4L1A6NKN8 68 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 RNF212BA8MTL3 300 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 TM9SF1O15321 606 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 LCMT2O60294 686 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 KLHL41O60662 606 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 ECI2O75521 394 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 GAS8-AS1O95177 125 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 CLDN1O95832 211 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 PATE4P0C8F1 98 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 CD1DP15813 335 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 AOC1P19801 751 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 PDHA2P29803 388 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 SAA4P35542 130 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 GRIA1P42261 906 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 PLA2G16P53816 162 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 VCPP55072 806 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 ATP5IP56385 69 aaPredicted RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 MAP2K1Q02750 393 aaPredicted RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 NCBP1Q09161 790 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 EIF2B1Q14232 305 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 TMEM187Q14656 261 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 SYPL1Q16563 259 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 MTHFSDQ2M296 383 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 PHYHD1Q5SRE7 291 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 ADAMTSL4-AS1Q5T5F5 129 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 WLSQ5T9L3 541 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 AGAP7PQ5VUJ5 663 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 PNCKQ6P2M8 343 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 LCLAT1Q6UWP7 414 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 GSG1LQ6UXU4 331 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 HACD2Q6Y1H2 254 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 TSEN54Q7Z6J9 526 aaKnown RBP3.78□□□□□ -1.8
VPS13A-211ENST00000484581 KCNMB4Q86W47 210 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 CARM1Q86X55 608 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 ART4Q93070 314 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 RCHY1Q96PM5 261 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 TNFRSF13CQ96RJ3 184 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 NPY6RQ99463 290 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 RIT2Q99578 217 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 NPAS2Q99743 824 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 ST6GALNAC5Q9BVH7 336 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 DGCR6LQ9BY27 220 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 MAGT1Q9H0U3 335 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 WDR13Q9H1Z4 485 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 IL1RAPQ9NPH3 570 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 B3GAT2Q9NPZ5 323 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 UFSP2Q9NUQ7 469 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 GNG12Q9UBI6 72 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 BAIAP2L1Q9UHR4 511 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 CYTH4Q9UIA0 394 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 RPH3ALQ9UNE2 315 aa3.78□□□□□ -1.8
VPS13A-211ENST00000484581 KANK1Q14678 1352 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 IGHV3-38A0A0C4DH36 116 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 FAM240BA0A1B0GVZ2 78 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 A0A1W2PNV4 684 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 METTL21EPA6NDL7 271 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 FAM47DPA6NHR8 397 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 ZNF264O43296 627 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 TPST2O60704 377 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 FRAT2O75474 233 aaPredicted RBP3.77□□□□□ -1.81
VPS13A-211ENST00000484581 STX11O75558 287 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 RHBDL1O75783 438 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 PDE5AO76074 875 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 SERPINA3P01011 423 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 CCDC159P0C7I6 412 aa3.77□□□□□ -1.81
VPS13A-211ENST00000484581 TPSB2P20231 275 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms