RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 NDOR1Q9UHB4 597 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 MKLN1Q9UL63 735 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 SRPK3Q9UPE1 567 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 PCDHGB2Q9Y5G2 931 aa13.07□□□□□ -0.32
CLK3-204ENST00000483723 HEMK1Q9Y5R4 338 aaPredicted RBP13.07□□□□□ -0.32
CLK3-204ENST00000483723 AGAP5A6NIR3 686 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 TRIM64CA6NLI5 447 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 TTC36A6NLP5 189 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 M0R3H8 397 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 ONECUT2O95948 504 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 CLPSP04118 112 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 CBLP22681 906 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 GABRA3P34903 492 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 RYKP34925 604 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 RORAP35398 523 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 CLK3P49761 638 aaKnown RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 ISL1P61371 349 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 POU6F2P78424 691 aaPredicted RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 HPCAP84074 193 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 KEAP1Q14145 624 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 ZNF267Q14586 743 aaPredicted RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 GANABQ14697 944 aaKnown RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 NPTX1Q15818 432 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 ZNF691Q5VV52 312 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 TTC33Q6PID6 262 aaPredicted RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 APLFQ8IW19 511 aaPredicted RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 ZNF619Q8N2I2 560 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 COX18Q8N8Q8 333 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 VANGL1Q8TAA9 524 aaPredicted RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 GPR151Q8TDV0 419 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 NR4A3Q92570 626 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 FKBP10Q96AY3 582 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 RMND5BQ96G75 393 aaPredicted RBP13.06□□□□□ -0.32
CLK3-204ENST00000483723 PTCHD1Q96NR3 888 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 GABARAPL3Q9BY60 117 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 KRT84Q9NSB2 600 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 RLIMQ9NVW2 624 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 ZNF232Q9UNY5 417 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 DNAH14Q0VDD8 3507 aa13.06□□□□□ -0.32
CLK3-204ENST00000483723 A0A1W2PRQ8 180 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 GXYLT2A0PJZ3 443 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 HRKO00198 91 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 BRINP1O60477 761 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 CCNB2O95067 398 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 OXSR1O95747 527 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 FBLP22087 321 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 SSTR4P31391 388 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 MPLP40238 635 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 RHAGQ02094 409 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 DGCR6Q14129 220 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 LPAL2Q16609 132 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 PLA2G2CQ5R387 149 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 CCNJQ5T5M9 372 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 GALNT5Q7Z7M9 940 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 HMGN2P46Q86SG4 172 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 SLITRK4Q8IW52 837 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 PEX5LQ8IYB4 626 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 C8orf59Q8N0T1 100 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 CLIP4Q8N3C7 705 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 OR7G1Q8NGA0 311 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 PIK3R3Q92569 461 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 CCDC74BQ96LY2 380 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 PITX2Q99697 317 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 MRPS26Q9BYN8 205 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 MKKSQ9NPJ1 570 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 FBXO34Q9NWN3 711 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 RHCGQ9UBD6 479 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 NDRG4Q9ULP0 352 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 ZNF443Q9Y2A4 671 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 PCDHGA8Q9Y5G5 932 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 HSPE1-MOB4S4R3N1 261 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 FER1L5A0AVI2 2057 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 ZDBF2Q9HCK1 2354 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 IGLV3-12A0A075B6K2 115 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 TRBV4-1A0A0J9YWV2 114 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 KIAA0513O60268 411 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 TPST2O60704 377 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 PRAMEF2O60811 474 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 KCNK2O95069 426 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 TFAP2AP05549 437 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 DBIP07108 87 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 ELAVL4P26378 380 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 TRHRP34981 398 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 EFNA3P52797 238 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 EEF1A1P68104 462 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 DAB2P98082 770 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 NPRL3Q12980 569 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 LARS2Q15031 903 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 MAPK14Q16539 360 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 ISLR2Q6UXK2 745 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 DEF8Q6ZN54 512 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 TSPYL5Q86VY4 417 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 PLPP5Q8NEB5 264 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 PTPMT1Q8WUK0 201 aaPredicted RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 PRRC1Q96M27 445 aa13.05□□□□□ -0.32
CLK3-204ENST00000483723 GTPBP2Q9BX10 602 aaKnown RBP13.05□□□□□ -0.32
CLK3-204ENST00000483723 TGIF2Q9GZN2 237 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms