RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 EXD1Q8NHP7 514 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 ZNF564Q8TBZ8 553 aaPredicted RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 SLC37A2Q8TED4 501 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 SYN2Q92777 582 aaPredicted RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 NSMCE3Q96MG7 304 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 TMEM68Q96MH6 324 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 TIMP4Q99727 224 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 GPA33Q99795 319 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 SYT11Q9BT88 431 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 TDRD1Q9BXT4 1180 aaKnown RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 HDHD5Q9BXW7 423 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 CAPS2Q9BXY5 557 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 EXO5Q9H790 373 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 GPN2Q9H9Y4 310 aaPredicted RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 TRIM36Q9NQ86 728 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 FARSBQ9NSD9 589 aaKnown RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 ETNK2Q9NVF9 386 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 OCIAD1Q9NX40 245 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 PKD2L2Q9NZM6 624 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 TMEM9Q9P0T7 183 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 NKX1-2Q9UD57 310 aaPredicted RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 ANAPC7Q9UJX3 599 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 CDC14AQ9UNH5 594 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 MRPS2Q9Y399 296 aaKnown RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 COMMD3-BMI1R4GMX3 469 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 NUP210LQ5VU65 1888 aa6.1□□□□□ -1.43
CLK1-212ENST00000482590 SPENQ96T58 3664 aaKnown RBP6.1□□□□□ -1.43
CLK1-212ENST00000482590 SPTAN1Q13813 2472 aaKnown RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 RP1L1Q8IWN7 2480 aaPredicted RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 COL12A1Q99715 3063 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 C1orf232A0A0U1RR37 186 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 GOLGA8OA6NCC3 632 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 GOLGA8NF8WBI6 632 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 HS3ST1O14792 307 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 PEX1O43933 1283 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 TBX19O60806 448 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 SOD1P00441 154 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 ADAP00813 363 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 STAG3L3P0CL85 134 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 PRKAR1AP10644 381 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 DRD4P21917 467 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 ACADLP28330 430 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 FOLR3P41439 243 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 MTTPP55157 894 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 CDC20Q12834 499 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 NFATC2Q13469 925 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 MAPK11Q15759 364 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 HIST2H2ACQ16777 129 aaPredicted RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 PYCR3Q53H96 274 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 TXNRD3NBQ6F5E7 133 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 GRHL2Q6ISB3 625 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 RGS7BPQ6MZT1 257 aaPredicted RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 TMEM88Q6PEY1 159 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 PRSS45Q7RTY3 260 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 TECPR1Q7Z6L1 1165 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 GPAT4Q86UL3 456 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 RTN4RL2Q86UN3 420 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 FAM219AQ8IW50 185 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 C9orf106Q8NAJ2 232 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 B4GALNT2Q8NHY0 566 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 PIH1D2Q8WWB5 315 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 SELENOMQ8WWX9 145 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 RTP4Q96DX8 246 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 SLC45A3Q96JT2 553 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 QRFPRQ96P65 431 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 CTRCQ99895 268 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 RIOK2Q9BVS4 552 aaKnown RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 DDX47Q9H0S4 455 aaKnown RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 GLOD4Q9HC38 313 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 UBAP1Q9NZ09 502 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 RCOR3Q9P2K3 495 aaPredicted RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 UBQLN2Q9UHD9 624 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 AAR2Q9Y312 384 aaKnown RBP6.09□□□□□ -1.43
CLK1-212ENST00000482590 PPIL1Q9Y3C6 166 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 GMEB1Q9Y692 573 aa6.09□□□□□ -1.43
CLK1-212ENST00000482590 MN1Q10571 1320 aaPredicted RBP6.08□□□□□ -1.44
CLK1-212ENST00000482590 KIR2DS5A0A0G2JLQ3 304 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 A0A0G2JNG1 304 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 A0A0U1RQS6 177 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 OR5K4A6NMS3 321 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 KIR2DS3K7RE56 304 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 PSMD9O00233 223 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 POLR1CO15160 346 aaPredicted RBP6.08□□□□□ -1.44
CLK1-212ENST00000482590 CIDEAO60543 219 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 GPC4O75487 556 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 GLCEO94923 617 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 MFN2O95140 757 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 CLDN7O95471 211 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 OTCP00480 354 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 SERPINC1P01008 464 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 TFP02787 698 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 ATP1A1P05023 1023 aaKnown RBP6.08□□□□□ -1.44
CLK1-212ENST00000482590 HLA-DQB2P05538 268 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 S100A6P06703 90 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 YES1P07947 543 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 SBK2P0C263 348 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 PCNAP12004 261 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 F3P13726 295 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 TCF4P15884 667 aa6.08□□□□□ -1.44
CLK1-212ENST00000482590 ZNF182P17025 639 aaPredicted RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms