RNA–Protein interactions for RNA: ENST00000481048.5

LRCH3-216, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 536 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-216ENST00000481048 RTL6Q6ICC9 239 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 GRHL2Q6ISB3 625 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 ARSKQ6UWY0 536 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 ZNF793Q6ZN11 406 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 C16orf47Q6ZP98 133 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 SLC29A4Q7RTT9 530 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 TBC1D1Q86TI0 1168 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 GPR180Q86V85 440 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 TMEM200AQ86VY9 491 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 CCDC71Q8IV32 467 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 PM20D2Q8IYS1 436 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 TAGAPQ8N103 731 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 LRRC25Q8N386 305 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 RPRMLQ8N4K4 120 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 CHDHQ8NE62 594 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 OR5M9Q8NGP3 310 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 NEIL3Q8TAT5 605 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 UBTD2Q8WUN7 234 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 SPACA9Q96E40 222 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 FBXL20Q96IG2 436 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 SECISBP2Q96T21 854 aaKnown RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 FOXC2Q99958 501 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 ERP44Q9BS26 406 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 TRIM31Q9BZY9 425 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 EXO5Q9H790 373 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 WDR41Q9HAD4 459 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 TRMT1Q9NXH9 659 aaKnown RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 NUDT4Q9NZJ9 180 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 OPTCQ9UBM4 332 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 ZNF629Q9UEG4 869 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 SNX24Q9Y343 169 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 FAM215AQ9Y5M1 114 aa5.92□□□□□ -1.46
LRCH3-216ENST00000481048 ZNF469Q96JG9 3925 aaPredicted RBP5.92□□□□□ -1.46
LRCH3-216ENST00000481048 KIAA1549Q9HCM3 1950 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 NUP214P35658 2090 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TCRBV9S1A1TA0A576 114 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 CXorf49A8MYA2 514 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 H0YIV9 168 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 FOXE1O00358 373 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 DVL2O14641 736 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TP53I11O14683 189 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 PDPK1O15530 556 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 PHGDHO43175 533 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 PROM1O43490 865 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ZNF354AO60765 605 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 KERAO60938 352 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SNX4O95219 450 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 NADKO95544 446 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 EPPINO95925 133 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 C1QAP02745 245 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 LTA4HP09960 611 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SLC35E2BP0CK96 405 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SLC35E2P0CK97 266 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 PCNAP12004 261 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 EPORP19235 508 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 APEX1P27695 318 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 CEACAM8P31997 349 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 PIGAP37287 484 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 KIR2DL3P43628 341 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 PIK3CGP48736 1102 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 DNASE1L1P49184 302 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TMED10P49755 219 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 RAP1GDS1P52306 607 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SLC37A1P57057 533 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 GNG11P61952 73 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 RPP38P78345 283 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SLC25A3Q00325 362 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TNFRSF17Q02223 184 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 MYBPHQ13203 477 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 CUL3Q13618 768 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ACAP2Q15057 778 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 FAM83EQ2M2I3 478 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 FBXL19-AS1Q494R0 122 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 C10orf62Q5T681 223 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TMEM81Q6P7N7 255 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 Q6ZPA2 131 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 Q6ZRM9 215 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 RAPH1Q70E73 1250 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 C9orf40Q8IXQ3 194 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 LIX1Q8N485 282 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SPATA6LQ8N4H0 392 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ZNF321PQ8N8H1 164 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 C17orf47Q8NEP4 570 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 HUS1BQ8NHY5 278 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 RIT1Q92963 219 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ESAMQ96AP7 390 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ATOH8Q96SQ7 321 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 OR51B5Q9H339 312 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 DDX31Q9H8H2 851 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 CAB39LQ9H9S4 337 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SAYSD1Q9NPB0 183 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 SNX15Q9NRS6 342 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 LYARQ9NX58 379 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TUBA8Q9NY65 449 aaPredicted RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 FETUBQ9UGM5 382 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ACOT9Q9Y305 439 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 UTP11Q9Y3A2 253 aaKnown RBP5.91□□□□□ -1.46
LRCH3-216ENST00000481048 L3MBTL1Q9Y468 752 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 ANGPTL3Q9Y5C1 460 aa5.91□□□□□ -1.46
LRCH3-216ENST00000481048 TNPO3Q9Y5L0 923 aaKnown RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms