RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 ZIM2Q9NZV7 527 aa14.19□□□□□ -0.14
C9orf3-217ENST00000479161 CBLCQ9ULV8 474 aa14.19□□□□□ -0.14
C9orf3-217ENST00000479161 ABCG2Q9UNQ0 655 aa14.19□□□□□ -0.14
C9orf3-217ENST00000479161 PTPN13Q12923 2485 aa14.19□□□□□ -0.14
C9orf3-217ENST00000479161 SPTAN1Q13813 2472 aaKnown RBP14.19□□□□□ -0.14
C9orf3-217ENST00000479161 DOPEY2Q9Y3R5 2298 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 PCNX1Q96RV3 2341 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 USP9YO00507 2555 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-217ENST00000479161 PINLYPA6NC86 204 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 OR14I1A6ND48 311 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 E9PBE3 544 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 NPIPA5E9PKD4 350 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 HCN1O60741 890 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 UGT2B11O75310 529 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 REM1O75628 298 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 IL33O95760 270 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 DNASE1L1P49184 302 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 CCT3P49368 545 aaKnown RBP14.18□□□□□ -0.14
C9orf3-217ENST00000479161 KCNJ2P63252 427 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 HBA1P69905 142 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 ZNF155Q12901 538 aaPredicted RBP14.18□□□□□ -0.14
C9orf3-217ENST00000479161 GAB1Q13480 694 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 UBAP2LQ14157 1087 aaKnown RBP14.18□□□□□ -0.14
C9orf3-217ENST00000479161 EIF2S3LQ2VIR3 472 aaKnown RBP14.18□□□□□ -0.14
C9orf3-217ENST00000479161 SLC9B1Q4ZJI4 515 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 C4orf17Q53FE4 359 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 HSP90B2PQ58FF3 399 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 AP1ARQ63HQ0 302 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 MFSD12Q6NUT3 480 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 ARHGAP11AQ6P4F7 1023 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 SPPL2CQ8IUH8 684 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 CHERPQ8IWX8 916 aaKnown RBP14.18□□□□□ -0.14
C9orf3-217ENST00000479161 FAM110BQ8TC76 370 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 ZNF597Q96LX8 424 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 RILPQ96NA2 401 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 B4GALT7Q9UBV7 327 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 BTNL2Q9UIR0 455 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 PCDHGB4Q9UN71 923 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 NPIPA1Q9UND3 350 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 SLC5A6Q9Y289 635 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 OR10H1Q9Y4A9 318 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 PCDHGB3Q9Y5G1 929 aa14.18□□□□□ -0.14
C9orf3-217ENST00000479161 A0A0G2JMM0 328 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 A0A1W2PPB8 328 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 A0A1W2PRS3 328 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 LRRC3CA6NJW4 275 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 KIR3DP1A8MWS1 328 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 PYCARD-AS1I3L0S3 204 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 HS6ST1O60243 411 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 KCNH1O95259 989 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 C6orf47O95873 294 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 IL6P05231 212 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 NGFRP08138 427 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 IL12BP29460 328 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 MAGEA8P43361 318 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 TXNL4AP83876 142 aaKnown RBP14.17□□□□□ -0.14
C9orf3-217ENST00000479161 PLGLB1Q02325 96 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 SRSF1Q07955 248 aaKnown RBP eCLIP14.17□□□□□ -0.146e-7■■■□□ 17.9
C9orf3-217ENST00000479161 SLC10A1Q14973 349 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.17□□□□□ -0.14
C9orf3-217ENST00000479161 FNDC7Q5VTL7 733 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 TIGD3Q6B0B8 471 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 CDC73Q6P1J9 531 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 MSANTD1Q6ZTZ1 278 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 ACAD11Q709F0 780 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 PRR22Q8IZ63 422 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 TMEM251Q8N6I4 163 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 PRR7Q8TB68 274 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 MIPOL1Q8TD10 442 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 ADOQ96SZ5 270 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 UBQLN3Q9H347 655 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 PIGUQ9H490 435 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 ZNF703Q9H7S9 590 aaPredicted RBP14.17□□□□□ -0.14
C9orf3-217ENST00000479161 METTL7AQ9H8H3 244 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 ZCCHC3Q9NUD5 404 aaKnown RBP14.17□□□□□ -0.14
C9orf3-217ENST00000479161 GPATCH2Q9NW75 528 aa14.17□□□□□ -0.14
C9orf3-217ENST00000479161 MRPS18CQ9Y3D5 142 aaKnown RBP14.17□□□□□ -0.14
C9orf3-217ENST00000479161 HECTD1Q9ULT8 2610 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 NCKAP5O14513 1909 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 GOLGA8QA0A0J9YX86 632 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 GOLGA8OA6NCC3 632 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 PRAMEF25A6NGN4 478 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 DUXAA6NLW8 204 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 GOLGA8NF8WBI6 632 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 UBDO15205 165 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 SLC19A2O60779 497 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 ICOSLGO75144 302 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 HMGN2P05204 90 aaKnown RBP14.16□□□□□ -0.14
C9orf3-217ENST00000479161 PGRP06401 933 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 GUSBP08236 651 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 S100A3P33764 101 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 GABRA3P34903 492 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 PTGDSP41222 190 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 CA7P43166 264 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 UFM1P61960 85 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 PHC1P78364 1004 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 NNATQ16517 81 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 PGS1Q32NB8 556 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 PRAMEF20Q5VT98 475 aa14.16□□□□□ -0.14
C9orf3-217ENST00000479161 OR4F3Q6IEY1 312 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms