RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 LALBAP00709 142 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 IL7P13232 177 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 F3P13726 295 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 HTR3AP46098 478 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 RORCP51449 518 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 PSPHP78330 225 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 TJAP1Q5JTD0 557 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 AGAP6Q5VW22 663 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 TYW3Q6IPR3 259 aaKnown RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 SLC48A1Q6P1K1 146 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 C1orf94Q6P1W5 598 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 BBS1Q8NFJ9 593 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 OR2L5Q8NG80 312 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 TSACCQ96A04 125 aaPredicted RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 ELP4Q96EB1 424 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 SLC35A4Q96G79 324 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 AGAP4Q96P64 663 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 FAIM2Q9BWQ8 316 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 PLSCR3Q9NRY6 295 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 ADAM29Q9UKF5 820 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 SSR3Q9UNL2 185 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 SLC9A8Q9Y2E8 581 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 N6AMT1Q9Y5N5 214 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 FAM170BA6NMN3 283 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 ZNF670-ZNF695F2Z2N8 137 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 K7EQS6 105 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 RNGTTO60942 597 aaKnown RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 KRT8P05787 483 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 ZNF888P0CJ79 500 aaPredicted RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 GNSP15586 552 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 SIM1P81133 766 aaPredicted RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 EFNB1P98172 346 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 CDK5Q00535 292 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 LARS2Q15031 903 aaKnown RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 MLC1Q15049 377 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 VN1R4Q7Z5H5 301 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 OR7G2Q8NG99 324 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 OR4F15Q8NGB8 312 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 OR6F1Q8NGZ6 308 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 RNFT2Q96EX2 444 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 DIRAS2Q96HU8 199 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 PRRC1Q96M27 445 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 ZNF681Q96N22 645 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 MIXL1Q9H2W2 232 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 NDUFB11Q9NX14 153 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 TESQ9UGI8 421 aaKnown RBP10.13□□□□□ -0.79
VPS52-217ENST00000478934 ENTPD4Q9Y227 616 aa10.13□□□□□ -0.79
VPS52-217ENST00000478934 NPIPA5A0A0B4J1W7 369 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 ZC3H12DA2A288 527 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 HYKKA2RU49 373 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 EPOPA6NHQ4 379 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 NPIPA7E9PJI5 369 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 NPIPA8P0DM63 369 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 COL9A1P20849 921 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 RUNX1T1Q06455 604 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 BCL2A1Q16548 175 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 OCLNQ16625 522 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 DEFB134Q4QY38 66 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 ZNF730Q6ZMV8 503 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 ZNF517Q6ZMY9 492 aaPredicted RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 TRIM48Q8IWZ4 208 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 YAF2Q8IY57 180 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 FAM26EQ8N5C1 309 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 TMEM255BQ8WV15 326 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 PIK3R3Q92569 461 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 SMAD5Q99717 465 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 APOOQ9BUR5 198 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 C1QTNF2Q9BXJ5 285 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 POLDIP3Q9BY77 421 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 FBXO34Q9NWN3 711 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 CRNNQ9UBG3 495 aaPredicted RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 COMMD3Q9UBI1 195 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 SLC17A4Q9Y2C5 497 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 YBX2Q9Y2T7 364 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 SYNDIG1LA6NDD5 238 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 FAM183AA6NL82 134 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 P2RX6O15547 441 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 TSPAN19P0C672 248 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 CSNK2A2P19784 350 aaPredicted RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 C5AR1P21730 350 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 ETV6P41212 452 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 TGM3Q08188 693 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 DMPKQ09013 629 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 SRSF5Q13243 272 aaKnown RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 AGERQ15109 404 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 CRTC2Q53ET0 693 aaPredicted RBP10.12□□□□□ -0.79
VPS52-217ENST00000478934 TMEM35AQ53FP2 167 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 MEDAGQ5VYS4 303 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 PRSS41Q7RTY9 318 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 UBQLNLQ8IYU4 475 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 RAB42Q8N4Z0 105 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 PROKR2Q8NFJ6 384 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 OR4Q3Q8NH05 313 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 BBS10Q8TAM1 723 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 RASSF5Q8WWW0 418 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 LCN9Q8WX39 176 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 PATE1Q8WXA2 126 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 CDS1Q92903 461 aa10.12□□□□□ -0.79
VPS52-217ENST00000478934 GIMAP5Q96F15 307 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms